Isosphaera pallida: Isop_2419
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Entry
Isop_2419 CDS
T01407
Name
(GenBank) YD repeat protein
Organism
ipa
Isosphaera pallida
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
PT-HINT
FG-GAP
Bflower
DUF6443
AXH
Motif
Other DBs
NCBI-ProteinID:
ADV62993
UniProt:
E8QWU3
LinkDB
All DBs
Position
complement(3520004..3527479)
Genome browser
AA seq
2491 aa
AA seq
DB search
MRQHPMRKPLSSWVRKWFTPRRSQPIRRKPHLELEPLEPREMPAANPVLALGAETGRLPL
VRVLDQQGTLIRSFAAYDASVTGGVRTAVADLNRDGVNDIVTAPGPGAAPLVKVWDGASG
SLLNQFWAYDPAFRGGVQVAAGDIGRGEVGVVTGPDQGSSQVRVFNSQGVLRTGWDVFGP
SSTSGVRVALGYAANGNAAVFAAAGPGSTPQVQSIEIRTGQTLASFTAYAPTMTGGVWIA
AADLTGDGVSEIVTGAGPGYAPQVKVFSSTGRPLTEFLATSASDRNGVMVGVVTGREGQP
QIATLVGSSRSKQVRLFDPRSSGTPTPLASYRATGAGSLATPSDRSEVKRFDASNPTPRT
LRQSYRHRAIEVTAAGYSAFPVRYGDGVVHFQESDLAADGFGTSWGVTRSWTNEGAYSQG
QNVGRGWIIAETPSLIREVDPFWGAVVLTVVTGGTAQQVFDEQPGGSYVGRGGILDTLVY
ESASGQYRLTAADGTTLWFWDFDAAKPAQQQGQFAKLEDPKGNVTEVTALLADGRIGEVQ
RSAPASGSTVTESYLFTYVTGGVNAGLIASITQRRRVGSGPWNTVRKAEYVYYDGVEAHG
SAGDLKKVVVKDAAGAVLETSYYRYYVAGEASGYEGGLKFVFRPQAYARLAANVANPETA
TDGQIAPYADHYFEYDDQFRVTQEIAARAGDDANGGRGTFSFSYTTNELALGGDPNAWLI
KTVETLPDGNQNIVYTNANRQVMLKVFQDTATSQQWRSFYQYDAGGRLILAANPSAVTGY
DETSPDLLVNQWGNYQYLSDTTGLITVWTYGTLTTATETTPGDATGRLKQVAVQRGEFGT
AVPQQDVTYIQRTAGGSGLFFVANVTAYRNDDGTGAITTSYAYTWQGTTAQPESVTVTLP
VVSTEQNGPGTATTVTTVFDAYGRPIWRKDGGGFLTYIEYDPATGAVVKEIRDVDTTQTS
TFSHLPSGWTTPAGGGLHLTTTYEVDALGRVTKQVHPNGRVDYFTYNDVTREVRTYAGWD
TSTNAPTLPTQVVRADWANGYVETLTMSAMPTVADGRPTGTEPISDLQTLSRVYTNASGQ
VTQEDAYFNLAGLSYSTSTNLGTANTHFYRTEFGYDAAGRLDRTLSPTGTIYRTVWDSLG
RAVSQWVGLDDTPTSGGWSPTNTAGTDLVKVGENEYDNGGTGDGNLTKVTQFAGGGAAPR
VTQTWYDWRNRPVAVKSGAETSESDTVNRPLSYVEYDNLGQVTVAEVYDGDGVSVVDGDG
DGVPDRPAASLLRAKSVTSYDDLGRVYRTAVYSVDPLTGAVSTHALTSNTWYDARGQVVK
VASPGGLVEKYRYDGVGRLTQVFTSDGGGDTSYADAFDVGGDIVLSQAEYAYDANDNLLQ
TTVRQRFHDASGTGELGTPTSGIGARVSYAGFYYDLADRLIATVDVGTNGGTAWTRPGTV
PTRSDTVLVTSQTYNAAGWVESTTDPKGIVSKTYYDNLGRTTKTIANYVDGFVGDDNDIT
TEFTYNAVGLTSLTSRRPDGSGQTTQWVYGVSLATGSGLNSNDLVGQTRWPDPTMGNASS
AEQETVTVNALGQTLTTTDRNGTVHTLSYDVLGRVISDVVTTLGAGVDGSVRRIETAYDS
QGNAYLITSHDAPTGGNIVNQVKREFNGLGQLTSEWQEHAGAVTGSSPWVQYSYSEMTAG
ANHSRLVSITYPNGKVLNYNYAAGLDDAISRLSSLSENTGILESYDYLGESVVVARKHPQ
PGVDLSYIKRSGEANGDAGDPYTGLDRFGRIVDQRWLTSSDGSALDRLQYTYDRNGNRLS
RTNLIDAAFSESYSYDHLNQLIGFTRGSHSRSWDYDAQGNWESVTTNGSTQTRTHNAQNE
ITGISGATTPTYDANGNLTRDDAGRQFVYDAWNRLVAVKDAGGNTLKSYAYDGLHRRISE
TAGGVTTDLYYSDSWQVLEERVGGQVKAQYVWSPVYVDALVLRDRDSNGDGTLDERLYVV
QDANYNVTALFDNSGNVVERYVYDPFGQVTILDAGWNVLAGSSFAWLYLHQGGRFDATSG
LYHFRFRDYSPTLGRWTSLDPIRYDAGDVNLYRVLGNGLPNRLDPLGLFDLWDWLANDVI
GTDNVRSWDSVLGHHRTGWFAQLSNGAAGMGDTVSMGLTGRVRQGLGYDDVVDYHSGAYA
VGEVAGTGVNLGLAFVNPCAVGGSIGTGVRVINGIQAFGGSLNAGDNLAAGNYGAAALDL
IGVAGNSFQMLRPCFPGEVQVLTRRGWVRWDALTTSDEVLSLPEDQPEGELAYRPVEEVF
RRWGVIWEVTVAGRVLRTTAEHPFWVRGKGWTAAKELRAGDALRSHDGQWLAVEGVRDTG
PEEAVYNCRVAEYHTYFVGDEGWGWSVWAHNSYNPPSTAVRAGEAGSYSSLHARRVTGDG
LTPHHMPQAALGFTNYGEGGALMLPHAEHVLTRTYGVRGARLAVQEAGVPFRTVLARDIQ
DVRRIAGSRYNQGLLDLIQYYRTNFPHLMTK
NT seq
7476 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagcaccccatgcgaaagcccctctcgtcctgggttcggaaatggttcacgcca
cggcggtcacagccgattcgccgcaaaccccatctggaactcgaaccactggagccgcgc
gagatgccggcggccaatcccgttctggcgctgggagccgagaccgggcggctgccgctg
gtgcgtgtgctcgaccagcaagggacactgatccgctcgttcgccgcctatgacgcctcg
gtcacgggcggtgtccgcacggcggtcgctgacctgaaccgcgacggagtcaatgacatt
gtgactgctcctggtccgggtgcggctccgttggtcaaagtttgggacggagccagcggt
tcgttgctgaaccagttttgggcgtatgaccctgccttccggggtggtgtgcaggtggcc
gcgggcgacatcggacgcggcgaggttggcgtcgtcaccggtcccgatcaaggcagttcg
caggtgcgggtgtttaacagccagggggtgctccgcaccggttgggacgtgtttggcccg
tcgtccacgagtggggtacgcgtggccctcggctatgcggccaacggtaacgcggcggtg
ttcgcggccgcggggccggggagtaccccacaagtccagagcatcgagatccgcacgggc
cagaccctggccagcttcacggcgtatgccccgacgatgacgggcggagtctggatcgcg
gccgccgacctcaccggcgacggcgtgagcgagatcgtcaccggggccgggccggggtac
gcgccgcaggtcaaggtattcagcagcaccggccggccgctgaccgagttcctggcgacg
tccgcatcggaccgcaacggcgtgatggtgggtgtcgtcacgggccgggagggccagccg
cagattgccaccctggtcggcagcagccgcagcaaacaggtgcggctctttgatccgcgt
tccagcggcacgccaactccgctggcgtcataccgggcaaccggagccgggtcattggcg
acgccaagtgatcgttccgaggtcaagcggttcgatgcgagcaacccgacgccacggacg
ctgcggcagtcctatcgtcatcgcgcgattgaggtgacggccgccggctactcggccttc
ccggtccgctacggcgacggggtggtgcatttccaggagagcgacctggccgccgacggc
ttcggcacctcctggggcgtcacccgcagttggaccaacgagggggcgtatagccagggg
cagaacgtcggccgcggctggatcatcgcggaaaccccctcgctgatccgggaagtcgat
ccgttctggggggccgtggtgctgaccgtggtgaccggcggcacggcccaacaggtcttt
gatgagcagcccggcggctcgtatgtcggccgcggcggcatcctcgacaccttggtgtat
gagtcggcgtcgggccagtaccgcttgactgctgcggatggtacgacgctttggttctgg
gacttcgacgcggccaagccggcccagcagcagggccagttcgcgaaactcgaagacccg
aaggggaacgtcaccgaggtgacggcgcttttggccgacggccggattggcgaggtgcag
cggtcggcccccgcgagcggctcgaccgtgaccgagtcgtacctgttcacctacgtgacc
ggcggggtcaacgccgggctgattgcctcgatcacgcaacgtcgccgggtgggcagcggg
ccgtggaacaccgtccgcaaggccgagtacgtctactacgacggcgtcgaagcgcacggt
agcgccggcgacctgaagaaagtcgtggtcaaggacgcggcaggcgcggtcctggagacc
agctattaccgctactacgtggccggggaggcgagcggctacgagggcgggctgaaattc
gtcttccggccgcaggcctacgcccggctggcagccaacgtcgcgaaccccgagacggcg
accgatggccagatcgccccgtatgccgatcactacttcgagtacgacgaccagttccgc
gtgacccaggagatcgccgctcgggcgggggatgacgccaacggcggccgcggcaccttc
agcttcagctacacgaccaacgaactcgccttgggcggcgacccaaacgcctggctgatc
aagacggtggaaacactgcccgacggcaaccagaacatcgtgtacaccaacgccaatcgt
caggtgatgctgaaggtgttccaggacacggccaccagccagcagtggcggtcgttctat
caatacgatgcgggcgggaggctgatcctggcggctaacccgtcggcggtgactggctac
gacgagacctcgcccgacctgctggtcaaccagtggggcaactatcagtacttgtctgac
acgacgggtctgataacggtctggacctatgggacgctcacaacggccacggagacgaca
ccgggcgatgctaccggccggctcaagcaggtggcggtgcagcggggtgagttcggcacg
gcggtcccgcagcaggacgtgacctacatccagcggacggcgggtgggtcggggctgttc
ttcgtagccaacgtcactgcctatcgcaatgacgacggcaccggggcgatcaccaccagt
tacgcctacacctggcagggaacgacggcgcagccggagtcagtcaccgtcacgctgccg
gtggtttcaacggagcagaacggtccgggcacggcaacgacggtcaccacggtgttcgat
gcgtatggccggccgatctggcggaaggacgggggcggtttcctgacctacatcgagtat
gatccggccaccggggcggtggtgaaggaaatccgcgatgtggacaccacgcaaacgtcc
accttcagccatctgcccagcggttggaccacgccggccggcggcggcctgcacctgacg
acgacctacgaggtggacgccctgggccgcgtgaccaagcaggtgcatcccaatggtcgg
gtcgattacttcacctacaacgacgtgacccgggaagtccgcacctacgccggctgggat
acgagcacgaacgcgccaaccctgccgacgcaggtggtgcgggccgactgggccaacggc
tacgtcgagacgctgaccatgtcggccatgcccacggttgcggatggccggccgaccggg
accgagccgatcagcgatctgcaaacgctgtcgcgggtctacaccaatgctagcggccag
gtcacgcaggaggacgcctacttcaacctggccgggctgagctactccacctcgacgaac
ctgggcacggccaacacgcacttctaccgcaccgagttcggctatgacgccgccggccgc
ctcgaccgcacgctgtcgcccaccggcaccatctaccgcacggtttgggacagtctgggg
cgggcggtgagtcagtgggtcgggctggacgacacgccgaccagcggcggctggagcccc
accaacaccgccgggacagacctggtgaaggtaggcgagaacgagtacgacaatggcggc
accggcgacggcaacttgacgaaagtgacacaattcgccggcggcggtgcggccccgcgc
gtgacgcagacctggtacgactggcgcaaccgcccggtggccgtgaagtccggcgccgag
acgagtgagtcggatacggtcaatcgtcccctgtcgtatgtggagtacgacaatctcgga
caagtgacggtcgccgaggtctacgacggtgacggcgtgagcgtggtcgatggcgatggc
gacggcgtgcccgaccgaccggccgcctcgttactgcgcgccaagagcgtcaccagctac
gacgacctcggccgggtctaccggaccgcggtctacagcgtcgatccgctcaccggggct
gtctcgacccacgcgctgaccagcaacacctggtacgacgcccgcgggcaagtggtcaag
gtcgcctcgcccggcgggttggtggagaagtaccgctacgatggagtaggtcggctcacg
caggtgtttaccagcgacggcggcggggacaccagctacgccgacgccttcgatgtcggc
ggtgacatcgtgctgtcacaggccgagtatgcctacgacgccaacgacaacctgttgcag
acgaccgtgcgccagcggttccacgacgccagcggcaccggtgagttgggcacgccgacc
agcggcatcggtgcccgtgtcagttatgcaggattttactacgacctcgccgaccggctc
attgccaccgtcgatgtcggcaccaatggcggcaccgcctggacacggcctggcaccgta
ccgactcgctccgatacggtgctggtgaccagccagacatacaacgccgccggctgggtc
gaatcgaccaccgaccccaaggggatcgtcagcaagacttactacgacaacctgggccgc
accaccaagaccatcgccaattacgtcgatggctttgtcggcgacgacaacgacatcacc
accgagttcacttacaacgcggttggtttgaccagtctgaccagccggcgccccgatggc
agcggacagaccacccagtgggtctacggcgtctccctggccaccggcagcgggctgaac
tccaacgatctggtcggccagacccgctggcccgacccgaccatgggcaatgccagcagc
gccgagcaggagacggtgacggtcaacgccctgggccagaccctgacaaccaccgaccgc
aacggcaccgtccacacgctgagctacgacgtgctgggccgcgtgatctccgacgtggtg
acgacgctaggggccggtgtggatggctcggtgcggcgcatcgagactgcctacgactcg
cagggcaacgcttacctcatcaccagccacgacgctcccacgggcggcaacatcgtcaac
caggtgaagcgggagttcaacggcctgggccaactcaccagcgaatggcaggagcacgcc
ggagcggtgaccggcagctcgccgtgggtgcagtacagctacagcgagatgacggctggg
gcgaaccactcccgcctggtcagcatcacctaccccaacggcaaggtgctgaactacaac
tacgccgccgggctggacgatgccatcagccggctgtcctcgctgtcggaaaacaccggg
attctggagagctacgactacctcggcgaatcggtggttgtggcccgcaagcatccgcag
ccgggcgtggacctcagctacatcaagcggtcgggcgaggccaacggcgacgccggcgac
ccatacaccggcctggaccgcttcggccgcattgtcgatcaacgctggctcaccagcagc
gacggctcggcgttggaccgcttgcaatacacctacgaccgaaatggcaatcgtctgagc
cggaccaatctcatcgacgccgccttcagcgagagctacagctacgaccacctcaaccag
ctcattggcttcacacgcggctcgcatagccgcagttgggactatgacgcccaaggaaac
tgggagagcgtcaccaccaacggcagcacgcagacgcggacgcacaacgcccagaacgag
atcaccggtatcagcggggcgaccacgccgacctacgacgccaacggcaacctgacgcgg
gacgatgccggccggcagttcgtctacgacgcctggaatcggctggtggcggtgaaggat
gccggcggcaacacgctgaagagttacgcctacgatggtctgcatcggcggatcagcgag
acggcaggcggggtgacgaccgacctgtactactcggattcctggcaggtgctggaggag
cgcgtcggcgggcaggtcaaggcccagtacgtctggtcgccggtctacgtcgatgccctg
gtgctgcgtgatcgcgacagcaacggcgacggcaccctcgacgagcgcttgtacgttgtg
caggatgccaactataatgtcaccgcgctctttgacaattcgggcaacgtggtcgaacgc
tacgtctacgacccgttcggccaggtgacgatcctcgacgctggctggaacgtcttggcc
ggcagctcctttgcctggctctacctgcaccagggcggccggttcgacgccaccagtggc
ctgtaccacttccgcttccgagactactcccccaccctcggccgctggaccagcctcgac
ccgatccgctacgacgccggggacgtcaacctctatcgggtattaggcaacggtctgccg
aaccggctcgatccgttggggctgttcgacctctgggactggctcgccaacgatgtgatc
ggaacggacaacgtgcgcagctgggattccgttctgggtcaccaccgcaccggctggttc
gctcaactcagcaacggcgcggcaggcatgggcgatacggtcagcatggggctgaccggt
cgggtgcggcagggcctcggctatgacgatgtcgttgactaccactcgggagcctacgct
gtcggtgaggttgccggcacgggggtcaacctcgggctagccttcgtcaacccctgtgcc
gtcggcggcagcatcgggactggcgtgcgggtgatcaacggcatccaggcgtttggcggt
tcactgaatgctggcgacaatctggcggcagggaattatggggcggcggctctggacctg
atcggggtcgcgggcaacagcttccagatgctgcggccgtgcttcccgggggaggtgcaa
gtcctgacgcggcggggttgggtccgctgggatgcattgacgacgagtgacgaagtgttg
tcgctgccggaggatcagccggagggagagttggcgtatcggccggtggaggaggtgttc
cggcgatggggtgtgatctgggaggtgacggttgcggggcgggtgctgcggacgacggcg
gagcatccgttctgggtgcggggcaaaggctggacggcggccaaggaattgcgagccggc
gatgccttgcggtcgcacgacggccagtggctggcggtcgagggcgttcgggacacgggc
cccgaggaggcggtgtacaactgccgcgtggcggagtatcacacctacttcgtcggggac
gaagggtggggctggagtgtctgggcgcataatagttataatccaccaagtacagcggtc
cgggctggtgaagcgggctcatattcgtccttgcatgcaaggcgagttaccggagatggc
cttacaccccaccacatgccccaagctgcgctagggttcaccaactacggagaaggtgga
gcattgatgcttccccacgctgaacacgttttgacacgaacctatggtgtgcgtggcgct
cgccttgctgtacaagaagctggtgttcctttccgtacagtactggctcgggacatccaa
gatgtacgtcgaattgcaggtagtcgctataaccaagggttactcgaccttatccaatac
taccgcacgaactttccacatttgatgacgaaatag
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integrated database retrieval system
