Ictalurus punctatus (channel catfish): 108258137
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Entry
108258137 CDS
T04658
Name
(RefSeq) integrin alpha-IIb isoform X1
KO
K06476
integrin alpha 2B
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04510
Focal adhesion
ipu04512
ECM-receptor interaction
ipu04810
Regulation of actin cytoskeleton
ipu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108258137
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108258137
09142 Cell motility
04820 Cytoskeleton in muscle cells
108258137
04810 Regulation of actin cytoskeleton
108258137
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108258137
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108258137
04515 Cell adhesion molecules [BR:
ipu04515
]
108258137
04090 CD molecules [BR:
ipu04090
]
108258137
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108258137
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108258137
Cell adhesion molecules [BR:
ipu04515
]
Integrins
Integrin alpha subunits
108258137
CD molecules [BR:
ipu04090
]
Proteins
108258137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_2
Integrin_A_Ig_3
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
FG-GAP_2
Motif
Other DBs
NCBI-GeneID:
108258137
NCBI-ProteinID:
XP_017312051
Ensembl:
ENSIPUG00000023401
UniProt:
W5UMP0
LinkDB
All DBs
Position
2:complement(31941099..31970080)
Genome browser
AA seq
1050 aa
AA seq
DB search
MEGISNGLFLLTICFTASVFPRQCSSFNLDLTNYTEFSGPNGSYFGFSVDFFRTRSQEVS
IIVGAPRDNVGPSRGGSVFICPWNSTEQACQKLNFDETGDVNFTFIQRLLVSHKSNQWLG
ATVRTYDSFVLACAPLFHWNVFQYKDEAMNTPVGNCQLLNVLTGELANYAPCRGYEVENT
YAQRKHYRDRRYCEAGFSSDISEDGRVVLGAPGGFFFQGQIITAPLQNIMYSGRTFTPVH
SVPQEKTSLETSDNYDIYLGFSVAIGHFNADNISDYVASLPLDLNSAGSVKIFDGASQMY
PRIMTSLKGSQVASYFGHCIAVTDINGDRRDDILVGAPLFMEHLSTHKLREVGQVYVYLQ
KEGYRFSPKPEQTLSGTHPYGRFGITIAPLGDINHDGYNDVAVGAPGTGEGGVVFIYMGQ
SDGLKPQYVQVIKSPFQSLASAFGFSIRGGTDIDNNGYPDVIVGAWGADKVAVYRSKAVV
GTKAQLSFLPDFLQPDEKLCQLHGNPISCFTIRLCISVSGYKIPEEIVLNAELQLDKLKS
NVARRTFLLESQQPYSHFQLTVSRDKGTFCKNLTAYLLSEFKDKLSPIFISLIYSLANTH
EAMLHGQNVAVGQTQIVLDCGDDNICIPDLKLSAKARTDPLLIGDENPALLIITAENHGE
GAYETELYVHLPPQTHYQGVLINEEGYSHLLCGPKKDNVSVIVVCDLGNPMKSKQKIMAG
LYFSMTGLEEVETHVSFHLQIKSKNSHNPDSNAVEVKIQVQAVALLEMRGVSSPYEFVMP
IAEWESKDFIKNLEDVGPVVEHVYELRNKGPSAVNAKLVLHFPVQQNGSYVLYVFSNASE
ELLTCNTDPSQIDPFQLVRPEFINTTEAPVHHFNKREVELQELEVQQQPVHHHRRTVHVN
CSIDPCVVFTCEAPALQRDARAIVRVMARLWVDSFLQRPYVNYVLLSTAHYEVVSMLSKV
QPNVLPSGQAETNTSVVWRHPDGQVDVPLSWIVMAVIAGLLLLALLSIIFWKVGFFKRNR
PPTDDDGDETTHELKEEQSEYEDVSPKDQS
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaataagcaatggtctttttctcctcactatatgttttacagcaagtgttttc
ccacgtcagtgcagtagctttaatctggatctgactaattacacagagttttctgggcca
aacgggagttactttgggttttctgtggatttttttcggacaaggagccaagaagtaagc
attatagtgggtgcaccaagagacaatgtcgggccttcccgtggtggttctgtcttcatc
tgtccctggaattcaactgaacaagcatgtcaaaaactgaactttgacgaaacaggagat
gtaaacttcacatttatacaaagactccttgtgtcccataaatcaaaccaatggttggga
gcaacagtgcgtacctacgacagctttgtcctggcctgtgctccattattccactggaat
gtgtttcagtacaaagatgaggccatgaacacgccagtgggaaactgtcagcttctaaat
gtgctaactggagagttagcaaactatgccccctgtaggggatatgaggtggagaatact
tatgcacaaagaaaacattaccgagacagacgctactgtgaagcaggatttagctcagac
atctctgaggatggtagagtggtccttggcgctcctggaggcttcttcttccaaggtcag
atcattactgcacctctccaaaacatcatgtacagtggcaggacctttactccagttcac
agtgtgccacaagagaaaacatcacttgagacatcagacaattatgacatttatctgggc
ttctctgtggcaataggtcatttcaatgctgacaacatctcagactatgtcgccagcctc
ccacttgacctaaactcagctggttctgtcaaaatctttgatggagcttcacaaatgtac
cccagaatcatgacatctttaaagggctctcaagtagcttcctattttggccattgtatt
gctgtgactgacataaatggtgataggagggatgatatcctagttggtgcgcctctcttc
atggagcacttgtccacacataagctgcgcgaggtgggccaggtgtacgtttacctgcag
aaggaaggttaccgcttctccccaaagcctgagcagaccttatcaggcactcacccttac
ggacgctttggcatcactatcgctcctttgggagatatcaaccatgatggctacaatgat
gtggccgtgggggcaccaggcactggtgaagggggtgtggtgttcatctatatgggacag
agtgatggtttgaaaccacagtatgtgcaagtcatcaagagccctttccagtctcttgca
tcagcattcggttttagcataagaggaggaacagacatcgacaacaatggatatccagat
gttattgttggtgcatggggagcagataaagtggctgtatacaggtcaaaagctgtagtg
gggaccaaagcccagctttcctttctacctgatttcctacagcctgatgaaaaattatgt
cagctgcatggcaatcccatctcctgctttactatcaggctgtgcattagtgtgtctggg
tacaaaataccagaggagattgtgttgaatgcggagctccagctggataaactgaagtca
aatgtggcaagacggaccttcctgctggagtctcaacagccatacagccattttcagctc
accgttagcagagataaaggaacattttgtaagaacctcaccgcatacttactgtcagag
ttcaaggacaagctgagccctatcttcatctcactgatctatagcctagccaatacccat
gaagcaatgttacatggacaaaatgttgcagttggccagacacagattgttcttgactgc
ggtgatgataacatctgcatccctgatttgaagctttcagccaaggcgcgcacagatcct
ctccttattggggacgagaacccagctctcctgatcatcactgctgagaatcatggtgaa
ggagcgtatgagacagaactgtatgtccatcttccacctcaaacacactaccagggtgtg
ctaattaatgaggagggctatagtcatcttctttgtggtccaaagaaagataatgtctct
gtcatcgtggtgtgtgatctggggaacccaatgaaatctaaacagaagatcatggctggc
ctgtacttcagcatgacagggctggaggaggtcgagacccatgtgtccttccatttacaa
attaaaagcaagaacagtcataacccagacagcaacgcagtggaagtgaagatccaagtt
caggctgtggctttgcttgagatgcggggagtctcctctccttacgagttcgtcatgcca
attgctgaatgggaatcaaaagatttcatcaagaatttggaggatgtgggccccgttgta
gagcatgtttatgagttaaggaataaagggccgagtgcagtcaatgccaaactggtgctc
catttcccagtacagcagaatggctcttatgtgctctatgtgttcagcaacgcttcagag
gaactcctgacatgcaacacagacccttcccagatcgatccatttcagcttgtgagacca
gagttcattaatactactgaggctcctgttcaccattttaacaaacgggaggtggagctg
caggagctggaggtacagcaacagcctgtgcatcatcatagaaggacggtgcatgtgaat
tgctccattgatccgtgtgtggtgttcacctgtgaggctccagctctacagagagatgcc
agagccatagtgagagtgatggcacgtttgtgggttgatagtttcttacagaggccttat
gtgaattacgtcctcttgtccactgctcactatgaggtagtaagcatgctgtccaaggtc
caaccaaatgtcttgcctagtggacaagcagagacaaacaccagtgtggtttggaggcat
cctgatggccaggtggacgtgccactgtcgtggattgtgatggccgtaattgctggcctc
ctgctcctggctttgctgagcatcatcttctggaaggtgggatttttcaagcgcaaccgt
ccaccaactgatgatgacggtgatgagaccactcatgagctgaaagaagagcaatcagag
tacgaagatgtctcaccaaaagaccagtcctga
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integrated database retrieval system
