Ictalurus punctatus (channel catfish): 108260475
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Entry
108260475 CDS
T04658
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108260475
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
108260475
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
108260475
NCBI-ProteinID:
XP_017316300
Ensembl:
ENSIPUG00000000590
UniProt:
A0A2D0QG03
LinkDB
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Position
2:13446188..13479146
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AA seq
496 aa
AA seq
DB search
MAATDIQPEPVQIDFTKELLSSSELFQRRSRSHKIPVRGQKEFLPNYSVQQKACLQKTLD
EHWMLMTEERLERAGNLVNAEWIPEEKIVKLQSPAGKFWQTMGFSDQGKQCLFPEEALYL
MECGSLQVFYQDLPLSIQEGYETFLSAETVTFLQYQVFGHLKRLGYVVNRFDARPSKQLK
RKWSRSPSFRLCAKKSTASPEVSAGQHKGEIKTSVPYSNLETPGQLQRQQTFQDDALKSD
PESDRAPERNWWTNVSRQLQPDSLQTSEHCWDFSCIFFPDLGSYSGNRACLPPPDPSLLP
GALQVSECHLAHWHRNIHLKEECWSKQKWQRDQERNRCSINDDQEVCRCRNWVEYLELLE
KRRSQQHNERPTHLGEQEVMPLAQPGKCSSHRELLEQVSIIQSYDLLVGNSRLPGSDHWR
ITFNVYQPDTEFKKSYPGKPYTHLCVCSFDGPVPDLHALKELSFQSGDVSVTFAVVDHGD
ISFYCFKEFKLPTDVY
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgaccgatattcaaccggaacctgttcagatagattttactaaagaattgctg
agttcatcagaactatttcaaagacggagtcgaagtcataagattcctgtgaggggacaa
aaagaatttttgccaaattactctgtgcagcaaaaggcatgtctgcagaagacccttgac
gagcactggatgcttatgacagaggaacgattggaacgagctgggaaccttgtgaatgcg
gaatggatccctgaggaaaagatagtgaaactgcagtctccagcaggaaaattttggcag
acaatgggattttctgatcaaggaaagcagtgcttgtttccagaggaggctctttatctc
atggaatgtggcagtctgcaagtgttctaccaggatcttcctctctccatccaggagggt
tatgaaactttcctttctgctgaaactgtgactttccttcagtaccaggtgtttggtcat
ttaaagagactgggatatgtggtaaatcgatttgatgctagaccaagcaagcagctgaag
aggaaatggagccggagtcccagttttagattgtgtgctaagaaaagtactgcatctcca
gaggtatctgcaggacagcataaaggtgaaattaagaccagtgtcccatacagcaacttg
gaaactccaggccaactacaaagacaacagacctttcaggatgatgcattaaaatctgat
ccagaatcagacagagctccagagaggaactggtggacaaatgtatcaagacaactccag
cctgattcactccagacttcggagcattgctgggatttcagctgcatcttttttccagac
ctggggtcatatagtggcaaccgtgcctgccttccccctcctgatcccagcttgctccct
ggtgctctgcaggtatctgagtgccacctggctcactggcacagaaatatccatttgaag
gaggaatgttggtccaagcaaaagtggcagagggaccaagaacgaaacagatgcagcatt
aatgatgaccaagaggtgtgtcggtgcaggaactgggttgaatatttagaactattggag
aaaaggaggagccagcagcacaacgaaaggcccacacaccttggggaacaggaggttatg
cctcttgctcagcccggaaagtgtagttcacatcgtgagctcctggagcaagtcagcatt
attcagtcttatgatttgctggtaggaaactccaggttacctggctcagaccattggagg
atcactttcaatgtataccagcctgacacagagtttaagaagagttatccaggaaagccc
tatacccacttgtgtgtttgcagtttcgatggtccggtgccagacttgcatgctttgaag
gagctgtccttccaaagtggagatgtttccgtgacattcgcagtggtggaccatggggac
atttccttctactgcttcaaggagtttaagctgcccactgatgtctactga
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integrated database retrieval system