Ictalurus punctatus (channel catfish): 108267840
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Entry
108267840 CDS
T04658
Name
(RefSeq) very long-chain specific acyl-CoA dehydrogenase, mitochondrial
KO
K09479
very long chain acyl-CoA dehydrogenase [EC:
1.3.8.9
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00071
Fatty acid degradation
ipu01100
Metabolic pathways
ipu01212
Fatty acid metabolism
Module
ipu_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
108267840
Enzymes [BR:
ipu01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.9 very-long-chain acyl-CoA dehydrogenase
108267840
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Gene cluster
GFIT
Motif
Pfam:
Acyl-CoA_dh_1
ACAD9-ACADV_C
Acyl-CoA_dh_M
Acyl-CoA_dh_N
Acyl-CoA_dh_2
Acyl-CoA-dh_C
Motif
Other DBs
NCBI-GeneID:
108267840
NCBI-ProteinID:
XP_017327781
Ensembl:
ENSIPUG00000001041
UniProt:
W5UHW0
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Position
7:21390536..21409633
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AA seq
660 aa
AA seq
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MLVRKVTQNAALCNAVLRLPQSVSGAQRHAGAVVAVQRLRPYVSQSAEAVLEKSAAATDV
ATKAGGVDKKAASVESKSFAVNMFKGQISTSQVFPFPTVLNEEQSEFLRDLVGPCSKFFD
EVNDPALNDQLEMVEEKTLEGLKEMGAFGLQVPADLGGVGLNNTQYARLVEIVGMHDLGV
GITLGAHQSIGFKGILLFGNKQQKEKYLPKLASGETIAAYCLTEPSSGSDAASIRSVAVP
SPCGKYFTLSGSKIWISNGGLAEIFTVFAKTPVKDEKTGEVKDKITAFIVEKSFGGVSHG
PAEKKMGIKASNTAEVYFENVRVPAECVLGEIGGGFKVAMNILNNGRFGMAAALSGTMKG
VLAKAVDHAANRTQFGNKIHNYGVIQEKMARMAMMQYVTESMAYMVSGNMDSGATDFQIE
AAISKIFASEAAWTVTDECIQIMGGMGYMKDAGVERVMRDLRIFRIFEGTNDILRLFVAL
NGFQNAGNQLKNLEKALKSPFSNAGLLAGEITKRAKRKAGMGTGLTLQGSVHPELAHSGA
LAVKAIEQFGEVIEELLLKHGKRIIDEQFVLKRVADCAIDLYAMVVVLSRASRSLSQGHS
SAQHEKMLCETWCTEAHERITQDIKFLRSGTSKQIFKNLRAISAAVVENGGVVSPHPLGF
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgctggtacgtaaagtcactcaaaatgcagcgctgtgcaacgctgtgcttcgcctacca
caatccgtgtcaggggcacaacgccatgcaggagctgttgtagctgtacaacgtctgcgt
ccttatgttagccaaagtgctgaggcggtgttggagaagtccgcagccgccactgatgtc
gccaccaaggctggaggagtggacaagaaggctgccagtgtggagtcaaaatcctttgct
gtgaacatgtttaaagggcagatcagtacctcacaggtgttcccctttcccacagtactg
aatgaggagcagtctgagtttctcagggatctggtgggaccttgttcgaagttctttgac
gaggtaaatgaccctgccctgaatgatcaactggagatggtagaggaaaaaaccttggag
gggctgaaggagatgggagcttttggcctgcaggttcctgctgatctgggtggcgtgggc
ctcaacaacacacagtatgccaggctggtggagattgtgggcatgcatgacctgggtgtg
ggcatcactcttggagcgcaccagtccatcggctttaagggcattctcctcttcggcaac
aagcaacagaaagagaagtaccttcccaagctggcctcaggtgaaacaatcgctgcatat
tgtctgactgagccatctagtggttcggatgctgcctctatcaggtccgttgctgttccc
tcaccctgtggaaagtacttcaccctcagtggaagtaaaatttggatcagtaatggaggc
ctggctgaaatctttactgtatttgctaagactccagtgaaagatgagaaaactggagaa
gtgaaggacaagatcactgcattcattgttgaaaaaagcttcggaggagtctcacatggc
cctgccgagaagaagatgggcatcaaggcctcaaacacagcagaggtgtactttgagaac
gtgcgtgttccggccgagtgtgtactgggagaaatcggtggaggatttaaggtggccatg
aatatccttaacaacgggcgctttggcatggctgcagcactctcaggaaccatgaagggt
gttctcgctaaagcggtggaccacgctgccaacagaacacagtttggtaacaaaatccac
aactacggagtcatacaggagaaaatggccagaatggccatgatgcagtatgttacagag
tctatggcctacatggtcagtggaaacatggacagtggagcaacagatttccagatcgag
gctgcgatcagtaaaatctttgcctctgaagcagcatggactgtgacagatgagtgtatt
cagattatgggtggaatgggttatatgaaggacgctggtgtcgagagggtcatgcgagac
ctgcgaatcttccgtatctttgagggcaccaacgatattctgcgactctttgtggcgctc
aacggcttccagaatgcaggaaatcaactgaagaacttagaaaaggctctgaaaagtcca
ttcagcaatgccggtttgttggctggggagatcaccaaacgtgccaaaaggaaggctggc
atgggtacaggcctcacgctgcagggaagtgtccatccagaactggcccatagtggtgct
cttgcggttaaagccatcgagcagtttggagaggtgattgaagaactgcttctaaagcat
ggcaagaggatcattgatgagcagtttgtgctgaaaagagttgcagactgtgcgattgac
ttgtatgctatggttgtggtgctctccagggcttccaggtctttgagtcagggtcactca
tctgctcagcatgagaagatgctgtgtgaaacctggtgcactgaggctcatgagagaatc
acgcaggacatcaagttcttgcggtcaggtacatctaagcagatcttcaagaacctgcgt
gccatttctgcagctgtggtagagaacggaggggtggtttctcctcatcccttgggcttt
taa
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