Ictalurus punctatus (channel catfish): 108268058
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Entry
108268058 CDS
T04658
Symbol
colgalt2a
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00310
Lysine degradation
ipu00514
Other types of O-glycan biosynthesis
ipu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108268058 (colgalt2a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
108268058 (colgalt2a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ipu01003
]
108268058 (colgalt2a)
Enzymes [BR:
ipu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
108268058 (colgalt2a)
Glycosyltransferases [BR:
ipu01003
]
O-Glycan biosynthesis
O-linked Gal type
108268058 (colgalt2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
108268058
NCBI-ProteinID:
XP_017328224
Ensembl:
ENSIPUG00000009209
UniProt:
A0A2D0RCF4
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Position
7:10022462..10032659
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AA seq
600 aa
AA seq
DB search
MLLLQVSILLWFGAFRFGLSDALVDLEPIRTESALLKPKVMLAILARNSQHSLPFYLGCI
ERLDYPKDRIAIWAAADHSIDNTTAMLQEWVSGVEGLYHSVRFRTTENGQSSYTDELGPK
HWPDSRFSHVMQLRHAALRSAQSQWADYILFADSDNLLTNPKVLSQLIAENRTLVAPMLE
SRTLYSNFWCGMTAQGYYKRTESYIPIRNWKRVGCHAVPMIHSTMLLDLRRHTSRALAFY
PLHQLYPWILDDILAFSFSARQAGVQMFVSNREHYGYLPVPLQTQQTLEDEAESFTHTLT
EAMLDFALEPSRYLHMPSRNKDRMAFDEIYIINLMRRMDRRVRMLRTLDVLGIEVTLTDA
VDGKALNSSQLQVLGIEMLPSYQDPYSGRVLTKGEIGCFLSHYNIWKQVVERKQQQVLVL
EDDIRFELNFKRRLNTIMEDIWQTELQWDLIYVGRKRLQVKNPERWVQGIKNLVYPDYSY
WTLGYALSLQGAKKLLEAKPLGKMLPVDEFLPVMFNKHPKEEYLAHFKQRDLLAFSVEPL
LLYPTHYTGEAGYSSDTETSTIWDNESINTDWDRQGTHKKQNRGDAAPVPTSDGGSRDEL
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttctgcaggtatctattctgctttggtttggagcctttaggttcggtttgtcc
gatgcgctcgtggacctggaaccgatccggactgagtcagccctgctcaaaccgaaggtg
atgctcgccattctggctcgcaattcccaacacagccttcctttttacctgggctgcatc
gaacgcttggactatccaaaggacaggattgctatctgggctgcagcagaccacagcatt
gataatacgacggccatgctgcaggagtgggtgtctggagtggagggactgtaccattcc
gtacgattccggaccacagagaatgggcagagttcctatactgatgagcttggtcccaag
cactggccagactccagattcagccatgtgatgcagctaaggcatgctgctctccgatct
gcccagtctcaatgggctgactacatcttgtttgccgacagcgataacttgctgacaaac
ccgaaggtcctgagccagctgatagccgagaaccgcacactggtggcccccatgctggaa
tccagaacgctctactccaacttctggtgtggtatgaccgcacaggggtattataagaga
accgagtcatacattcccattcgaaactggaagcgggttgggtgccacgccgtgcccatg
atccactccaccatgctgctggatttacgtcgccacaccagccgtgccctggccttctac
ccactccaccagctctacccatggatcctggatgacatcctagctttctccttttcagcg
agacaggcaggagtgcagatgtttgtgtctaacagagagcattatgggtatttgcctgtg
ccactgcagacccagcagaccctggaggatgaggcggagagcttcactcacacactcacg
gaggcaatgcttgatttcgccttggagccttcacgctatttgcacatgccatccagaaac
aaagacagaatggcatttgatgagatatacatcattaatctaatgcgccgcatggaccgt
agggtgcgtatgttgcgcactttggatgttttggggattgaagtcacactgactgatgct
gtggatggcaaagctttgaactcgtcgcagctccaggttttagggatagagatgctgccc
agctaccaagacccttactctggccgagtgctcacgaaaggagagatcggatgttttctc
agccattacaacatctggaagcaggtggtggaacgtaagcagcaacaggtactcgttcta
gaagatgacattcgctttgaactgaatttcaagaggcgtctgaacacaatcatggaggat
atttggcagacagagctccagtgggatttgatatacgtgggccgtaagcggttgcaggtg
aagaatcctgaacgctgggtgcaggggataaagaacctggtataccctgattattcctat
tggactctgggatacgcactttctcttcagggtgctaagaaactgctggaagccaaacct
ttgggcaaaatgctgccagtagatgagttcctgcctgttatgttcaacaagcaccctaaa
gaagagtacctggctcactttaagcaacgggacctgctagccttctcggtggaacctctc
ctcctctacccaacccactacacaggagaagcaggctatagcagtgacactgagacgtcc
accatctgggacaatgagagcatcaacacagactgggaccggcagggtacccacaaaaag
cagaaccgtggcgatgcagcccctgtacctacttccgatgggggcagcagggatgaactg
taa
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