Ictalurus punctatus (channel catfish): 108269111
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Entry
108269111 CDS
T04658
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 isoform X1
KO
K12490
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108269111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108269111
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108269111
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108269111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
RA
SAM_1
SAM_2
PH_6
PH_11
PH_8
PH_3
PH_13
CARD
Motif
Other DBs
NCBI-GeneID:
108269111
NCBI-ProteinID:
XP_017330178
Ensembl:
ENSIPUG00000000686
UniProt:
W5UK61
LinkDB
All DBs
Position
8:complement(14138125..14166321)
Genome browser
AA seq
1744 aa
AA seq
DB search
MYTMATIDAASDAQDLLASIHLEKYLNHFRQAGFLLARDFCHVDNAALNRLGVTATGHRK
RILKLVEHIQMICQHHRKDTELDRCNSESAIHEVTPDGHLSPQGNADTSFEALYNSSVPN
LSALVKRSHSECSATIVKPVPKPRTVFNKQRVKEPSLPMQQEAQLCRRSSQDSASSAILE
VSSVELHSLTSKDPKQILSEEKLNKSISSPDISGPLPPVPPRISRGVLPSTVRGMSSQAE
QSTPPRSPFPDSPSSYQCSPFTSMAGSPPSPPCSGLEMVSNEIYSGTLPGTPPTIWSRSI
PMPPPRQELNTSTDSNSTLNHTSSEPTKRTFAPADDQDEMISPYCETVFHGKWQNQHLED
ERSPKSVDRTGTKDDKLGDAHRHQSQSGLKRQSRGSPGDSPGYSTVGEPSSASRSFTLPP
HSLYPSELDEDQFISPYASFTSLSERPVPILSGWLDKLSPQGNYVFQKRYVKFDGKNLMY
YGSEKDTYPKGVIPLGAIQMARAAKDNKFEVVTNHRAFVFRADNEVQRSKWCSVLQEWVK
EQMVFGRPRFGPGSHCQKNGFLELKGIKSKIYAAIIAEQIWLYKNEQCFKNGIGITVIEA
RGATIRDGKNKSFDLITPYKAFSFTAESEREKREWMEALQESIAETLSDYEVAEKIWSNR
SNRVCADCKAINPDWASINLCVVICKNCAGQHRGLGTMVSKVQSLKLDTSVWSNEIVQLF
IMLGNDRANEFWATRLPAADEIDCDASPEQRREFITQKYREGRFRHSHPSFSTQEELLKA
LCTAVTEQNLLKTVTQLFAEAEAARLSDSNGHEKHLSLHYSYTQATGFQDLLTHKQTPQQ
AHNHFHSTLTNDSATVIHHINTVAVYISLIIKPYSFQHVISKLSACTSHSGGNQHFYIRF
YFLADSSVYDEIMQPVLYSGYLYKSCSMNKGTLSRRTREDFQKYWCSVEKSLLFYESDRC
HEPNMKIEVKDIICLGVSRPDSCTNNNGFIDRFRYTFELYLTSEKLVQFGLETPDALHSW
AKAIGKATTPLSCHCLLTREFERVGMLRYKAMLDPRQWKEGFFVLQKSNLFICPGNDGAA
EDIINLKRLQELSIASETDNHEKKDILVLVEKGRTLHLQGMGRTDFSLWYTDIQKAAGGK
ANTLKDQQLSRNDIPIIVDSCIAFITQYGLGHEGIYRKNGAKSRIKLLMEEFRRDARNVK
LRIGDNFIEDVTDVLKRFFREIDDPIFMADLHPYWKEAAKISNKTQRLDRYKELIRGLPR
VNRTTLAALISHLYRVQKCADLNQMCTKNLSLLFAPSLFQTDGKGEHEVKIIEDLIDNYL
YVFDIDEEHKTQIELEISLITTWKDTQLSQAGDLIIEVYLEEKMPDCCITLKVSPTMCAE
ELTNQVLYMRNVPAGEKDVWMTFEAIEDGELERPLHPKEKVLEQALQWCTMADPSSAYLL
VKKVPRGEMIDIFTAYKSEIVKFGVLKCREETPKLLQGTKFQERLFQIQDHKLLLMKDKK
TNKPEKEWQLKTMKIYIGIKKKLKAPTKWGFTVMIDKHQMYLSCSSETELWDWITSLLKA
QNDDLRPPVMRRHSSSDICKQKFGTMPLVPIRGEDSNTNSTMLSANKTLRKLHDRRTLSM
YFPMKVQQDSLEERDESPEPLYEEVGDFSLQVLKSLENSFLSSGHTKSREVPPRIESLGQ
GKSRSLERTVVPKLTRSTGGDGSLDTLMHEVPRASLERKSCSPSEELLLHELSTLCKKPE
DDEQ
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atgtacactatggcaacaattgatgcagcctcagatgcacaagacctgttggcttccatt
caccttgagaaatatctgaaccacttcagacaggcaggatttctgctggcccgggatttc
tgtcatgtggacaatgctgctcttaacagacttggagtgactgccaccggtcacaggaag
cggatcctcaaactggtcgagcacattcaaatgatctgccagcatcataggaaggacact
gagttggaccgctgtaactcagagtcagccattcatgaagtgactcctgatgggcatctt
tcacctcaaggaaatgcagacacatccttcgaagctctgtacaacagctcggtgccaaat
ttgtctgcgcttgtgaaacgctcccactcagagtgtagtgctaccattgtaaagccagtc
ccaaaacctagaactgtctttaacaaacagagggtgaaggagccttcgctacccatgcaa
caggaagcgcaactctgcagaaggtcctcccaggattctgcctcttctgccattctggaa
gtttcttctgttgaacttcatagcttaacttcgaaagacccaaaacaaatcttgagtgaa
gagaagttaaataaaagtatctcatccccagacattagcggaccactacctccagtaccc
ccaaggatcagccgtggggttctcccatccacagtcaggggcatgtcaagtcaggctgag
caaagcacccctccacgatcaccatttcctgactccccttccagttatcagtgttctcct
ttcaccagtatggctggttctccgcctagccctccatgctctggcttagagatggtctcc
aatgaaatctacagtggcactttacctggcactccacccactatctggagccgctctata
cctatgcccccgccacgccaggagctcaacacatctactgacagcaatagcactttaaat
cacacctcatcagaaccgactaaacgtacatttgctcctgctgatgaccaagatgaaatg
attagtccatactgtgaaactgttttccatggcaagtggcaaaatcaacatcttgaggat
gaaaggtctcccaagagtgtggatagaactggaaccaaagatgataagctaggagatgct
cataggcatcagagccagtctggtctcaagcggcagtctcgtggcagtcctggtgactcc
ccaggctacagcacagttggcgagccttcttctgcctcacgctccttcactctgcctcca
catagcctctaccctagcgaattggatgaagaccagttcatctccccgtatgcaagtttc
acctcactgtcggagaggcctgtacccatcctcagtggatggttggacaaactctccccc
caagggaattacgtgttccagaagcgctatgtaaagtttgatggaaaaaatctgatgtat
tatggcagtgaaaaggacacatacccaaaaggtgtgattcctcttggtgctatacaaatg
gccagagcagcaaaagacaacaaatttgaagttgtgacgaatcacagggcatttgttttc
cgtgcagacaatgaagtgcagaggagtaagtggtgcagtgtgctgcaggagtgggtgaag
gagcagatggtgtttggccggccacgttttggcccagggagccactgccagaagaatggc
ttcttagagcttaaagggataaagtcaaagatctatgcagcaattatagctgagcagatt
tggctgtataagaacgagcagtgttttaagaatggcattggaatcactgtaatcgaggcc
agaggcgctacaatccgagatggaaagaacaaaagctttgacctcataactccttacaag
gccttcagcttcacggctgagtcagagcgggagaaacgggagtggatggaagctctgcag
gagtcaatcgcagagacgctctccgattacgaggtggctgagaaaatctggtctaaccgc
tccaacagggtgtgtgcagactgcaaagccatcaatcccgactgggcctccatcaatctc
tgtgtggtcatttgcaagaactgcgcaggccagcacagaggactgggcacaatggtgtcc
aaagtgcagagtctgaaactggacaccagtgtttggagcaatgagatagttcagctcttc
ataatgctgggtaatgacagagccaatgagttctgggctaccaggctgccagcagctgat
gaaattgactgtgatgcctctccagaacagcggagggaatttataacccagaaatacaga
gaaggccgtttccgtcactctcaccccagctttagtacacaggaagagttacttaaggct
ctgtgcacagctgtgactgaacagaacctcttgaagacagtcactcagttatttgcagaa
gcagaagcggctcgactctcggactctaatggacatgagaagcacctttctctgcattac
tcttacacccaggccacaggttttcaggatttacttacacacaaacagacaccacagcag
gcacataaccacttccattccaccttaaccaatgactctgcaactgtcatccaccacatc
aacactgtagcagtgtatatttcactaatcattaagccttattcatttcaacatgtaatt
tcaaaattatcagcatgcacatcccacagtggtggtaatcagcatttctacattcggttc
tatttccttgcagattccagtgtgtatgatgagatcatgcagccagtcctgtattctggc
tacctctacaagtcatgctccatgaacaaaggcactttgtctcgcagaaccagggaagat
ttccaaaagtattggtgctcggtggagaagtctcttctgttttatgagtctgacaggtgc
catgagcccaacatgaagatagaggtcaaagatatcatctgtttaggagttagcaggcca
gactcatgcaccaacaacaacggcttcattgacaggtttcgatacactttcgaactgtac
ctaacatctgaaaaacttgtgcagtttggtttagaaactccagatgcactacacagttgg
gcaaaagctattggaaaggccaccacacctctgagctgccactgcttactgacgagggag
tttgagcgtgtgggcatgttgcgttataaggccatgctggacccgcggcagtggaaagag
ggcttctttgttctgcaaaagtccaacctcttcatttgccctggaaacgatggagctgct
gaggacattattaacctgaaacgcctgcaggagctcagtatagcatcagagacagacaat
catgaaaagaaagacattttggttctagtggaaaaaggaaggactctgcacctgcaaggc
atggggcgtacagacttctctctgtggtacacagacatccagaaggcagcaggaggcaaa
gccaacacgctgaaggaccaacaactgagcaggaacgacatccccatcattgtggacagc
tgcattgcttttattacacagtatggtctgggccatgaaggtatatacaggaaaaatgga
gccaagtccagaatcaagcttctgatggaggagttccggagagatgcccgcaacgtgaaa
ctccgcattggagacaatttcattgaggatgtgacagatgtgctgaagaggttcttccgt
gagattgatgaccccatattcatggcagatctgcacccatactggaaggaggctgccaag
atatctaataagacgcagagattggatagatataaagagctcatccgtggtttgccacga
gtcaaccgaaccactttggctgctctcatcagtcacctctacagggtacagaagtgtgcc
gatctgaaccaaatgtgcacaaagaacctatctctgctgttcgccccaagcctctttcag
acagacgggaaaggagagcatgaagtgaagatcatagaggacctcattgacaactatctg
tatgtctttgatattgatgaggaacacaaaactcagattgaactggaaatcagtctcatc
acaacctggaaggacacacagctctctcaggcaggagacctgattattgaggtctatctg
gaggaaaaaatgccagactgctgcatcactctgaaagtttcacccactatgtgtgcagag
gaactgactaaccaggtgctgtatatgaggaatgtccctgcaggtgaaaaggatgtgtgg
atgacctttgaagccattgaggatggggagcttgaacggcctcttcacccaaaagagaag
gttctggaacaagcactacagtggtgtaccatggctgatcctagttctgcatatttgttg
gtaaagaaggtacccagaggagaaatgattgatatctttacagcttacaagagtgaaatt
gtgaagtttggagttctgaagtgtcgtgaggagacacctaaacttctacaagggaccaaa
ttccaggaacgtctgttccaaatccaggatcacaaattactcttaatgaaggacaagaag
accaacaaacccgaaaaagagtggcagctaaaaactatgaagatttacattggaataaaa
aagaagttgaaagcaccaacaaaatggggtttcactgtgatgatagacaaacatcagatg
tatctcagttgttccagtgaaacagagctttgggactggataaccagtcttctgaaagca
cagaacgacgacttgcggcctcctgtgatgagacgccactcctcatctgacatctgcaag
cagaagtttggcaccatgcccttagtgccgatccgcggagaagacagcaacaccaactcc
accatgctttctgctaataagacgctgaggaagcttcacgataggaggacactatcaatg
tactttcccatgaaggtgcagcaagattcattggaggaacgggatgaaagcccagagcca
ctctacgaggaggttggtgactttagcctgcaggtgctgaagtccctggagaacagcttt
ctgtccagtggccacaccaagagtcgggaggtgcctccacgcattgagagcctcggccag
gggaagagcaggtccctggagcgcacagttgtcccaaaacttacccgttctactggggga
gatggatctctggacacactgatgcacgaagtaccacgtgcttctttagagcgcaaatca
tgtagtccttcagaagagctgctgttacatgaactctcaacactttgtaagaaaccagaa
gatgatgaacagtga
DBGET
integrated database retrieval system
