Ictalurus punctatus (channel catfish): 108271731
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Entry
108271731 CDS
T04658
Symbol
tgfa
Name
(RefSeq) protransforming growth factor alpha
KO
K08774
transforming growth factor, alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04012
ErbB signaling pathway
ipu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108271731 (tgfa)
04012 ErbB signaling pathway
108271731 (tgfa)
04020 Calcium signaling pathway
108271731 (tgfa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ipu04052
]
108271731 (tgfa)
Cytokines and neuropeptides [BR:
ipu04052
]
Cytokines
Growth factors (RTK binding)
108271731 (tgfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_Teneurin
EGF_laminin
EGF_2
New_glue
EGF
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
108271731
NCBI-ProteinID:
XP_017334931
Ensembl:
ENSIPUG00000017716
UniProt:
A0A2D0RXM0
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Position
11:complement(13094127..13104474)
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AA seq
189 aa
AA seq
DB search
MYRAFWDTIFLLSGYLFTYSQVQQNATSAATTMAMTPTTTATITATITATNTTAVSSTTV
RRKFIAAAVHSHFADCPDSHSHFCIHGTCRFLILEETQACVCHPGFIGVRCEYADLLAVV
ATNQRQHTLATILMLGILGSVLLVLLCTIINCWWRRGRWRQGPLLSCLSKKPNGIVKSGT
SCCHTETVV
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgagctttttgggatacgatatttctccttagtggctatttatttacatacagt
caagtgcagcaaaatgctacgtcagcagcaacaaccatggcaatgactcccaccacaacc
gccactataactgccactataactgccaccaacaccacagcagtgtcaagtactactgtt
agaagaaagttcatagcagcagcagtccactctcactttgctgactgtcctgactcccac
agccatttctgcatccatggaacatgccgctttctcatcctggaggagacgcaagcgtgt
gtgtgccacccaggcttcataggtgtgcgttgtgagtatgcagacctgctggcagtggta
gcaaccaaccaaaggcagcatacattggccactatattgatgctgggcatattgggcagt
gtcctgcttgtactgctttgcaccataataaattgttggtggaggcggggcagatggagg
caaggacctctgctttcctgtttgtcaaaaaaaccaaatggcatcgtaaaaagtgggaca
tcctgctgtcacacagagacagtggtttga
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integrated database retrieval system