Ictalurus punctatus (channel catfish): 108271935
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Entry
108271935 CDS
T04658
Symbol
si:dkey-197j19.6
Name
(RefSeq) actin nucleation-promoting factor WAS isoform X1
KO
K23612
neural Wiskott-Aldrich syndrome protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
ipu04520
Adherens junction
ipu04810
Regulation of actin cytoskeleton
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108271935 (si:dkey-197j19.6)
09144 Cellular community - eukaryotes
04520 Adherens junction
108271935 (si:dkey-197j19.6)
09142 Cell motility
04810 Regulation of actin cytoskeleton
108271935 (si:dkey-197j19.6)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108271935 (si:dkey-197j19.6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108271935 (si:dkey-197j19.6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108271935 (si:dkey-197j19.6)
Membrane trafficking [BR:
ipu04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
108271935 (si:dkey-197j19.6)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
WASP / WAVE
108271935 (si:dkey-197j19.6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WH1
Motif
Other DBs
NCBI-GeneID:
108271935
NCBI-ProteinID:
XP_017335405
UniProt:
A0A2D0RZL9
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All DBs
Position
11:complement(24909283..24915305)
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AA seq
265 aa
AA seq
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MSRVLSSLLSIRENGLVFNLLGSDCSASACAVVQLYLATTAGKGKTSEWQFHSCGVVCLV
QDKKLHSTFIRLFCVKRAKLLWEQELYTSFTYSTPCAFFHTFPGDECWAGLNFSDEDEAS
RFNTAVQNCISGTKARPVFVRTHSLDSASGWLLKNKLSTCLSLSRSASPKAPPPVESDET
STLSLAQKKGPLPPIPYNSDAETSVPSHQDHLKQRHSIPRPPSYPAPNLNMNPAGVKKSA
SFSPGGNYAFTVSKQERSLHFTDNI
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggtgttaagttctctcctgtcgatccgtgagaacggcctcgtctttaacctg
ctcggctccgactgcagcgcgtcagcttgtgccgtggtgcagttatacctggcaactacg
gctggtaaaggaaaaacatccgaatggcagtttcacagttgtggagtggtctgtctggtg
caggataaaaaattacattcaacatttatacggctcttttgtgtgaagagggccaagctg
ctctgggaacaggagctgtatacatcgttcacgtattccacaccctgcgcctttttccac
actttccccggtgatgaatgttgggcggggctgaacttttccgatgaggacgaggcgagc
cggttcaacacagctgtacagaactgcatcagcggcactaaagcgcgtcccgtgttcgtc
cggactcacagtctggactcggcctccggatggctgctgaagaacaaactgagcacctgt
ctgtctctcagccggtctgcgtcccctaaagctccaccgcctgtagagtcagacgagacc
agtactctttctctggcacagaagaaaggacccctgccacccatcccttataacagcgac
gcagagacgtctgttccatctcaccaggatcatcttaaacagaggcattcgattccacgc
cctccgtcgtacccagcccccaacctgaacatgaatccagcaggagtgaagaaaagtgcc
agcttttcaccgggaggaaattatgcttttaccgtctcgaaacaggaaagaagcttgcat
tttactgataacatatga
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