Ictalurus punctatus (channel catfish): 108272431
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Entry
108272431 CDS
T04658
Name
(RefSeq) double-stranded RNA-specific editase B2
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108272431
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108272431
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
ABATE
PRIMA1
Motif
Other DBs
NCBI-GeneID:
108272431
NCBI-ProteinID:
XP_017336342
Ensembl:
ENSIPUG00000000812
UniProt:
A0A2D0S0T1
LinkDB
All DBs
Position
1:33059917..33287835
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AA seq
754 aa
AA seq
DB search
MASILGGSSGGGAGSGQIRCKFKRRRRRRSKRKEKVSSMLSALIVPFKYMSPGPSSTEDE
DTLSTSSTEVKENWNTGNFEDRTIMASDRPSFFLSDSSRSSAGTLKRKRPLEEDNNGRVC
ELRVCCRRSSWSDTPKNAVVQLNELRPGLQYRTVSQTGPVHAPLFSIAVDVNGLTFEGTG
PTKKKAKMRAAELALSSFVQFPNAAQAHSAMGGVSNPTTDFTSDLSDFPETLFKGFEPDS
FRSAKSELLSSALRLRHTLDLMVVQARQGDGHFSTSPPTPEPPPPPSPVVLLNNLRPGAR
YACLCQSTRGRRARRCFVMAVLVDGRIFEGTGCSKKLAKRKAALSALQALFNITQAPEAR
VGMIKRPHLPQDFADAVFHLVMEKYSELIGCSTLMHACHKGLAGIIMTRGLDVRQAEVVA
LATGTKCINGEYLSDQGLTVNDCHAEITARRALLRFLYSHLELHLSKREEDKEQSIFIRH
KDSSFRLRENVLFHMYISTSPCGDARINSPYELTTDFSVHSNRPVVKKFHSHLRSKIESG
EGTLPVRCRSAVQTWDGVMQGERLITMSCTDKIARWNVLGLQGALLSHFVEPVYLYSVMV
GSVTHTGHLSRTLNQRMERLGSLPACYRRNQPVLSSLSSSECWQQLKASCFSMNWTAGDE
QLEVINASTGKRRDCGAPSRLCKRALFTRWNRVYRKLVASAPGSSTGPLTYGEAKQAAAS
YQSAKEQWVRALREAGLGTWVRKPAEQELFMLTA
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggcttccatactcggcggcagcagcggcggcggtgcgggaagcggccagatccggtgc
aagtttaaacggagaaggaggagaagatccaagcgcaaagaaaaagtaagcagcatgctg
tctgcactgattgtccccttcaagtatatgagtccaggtccgagcagcacagaggatgaa
gacacgctaagtaccagcagtacagaggtgaaagagaactggaacacggggaactttgaa
gaccgcacaatcatggcatcagatcgtccgtccttcttcctgtccgattcgtctcggagc
agcgcgggcactctgaaacggaagcgtccattagaggaggacaacaacgggcgtgtgtgt
gagctgcgagtgtgctgcagaagatcctcatggtcagacaccccgaagaatgccgtggtg
cagctgaacgagctgcgtccgggtctgcagtaccgcaccgtgtctcaaacgggcccggtg
cacgctccgctcttctccatcgccgtcgacgtcaacgggctcaccttcgagggaacgggt
cctactaagaaaaaggccaagatgagggcagctgagttagcgcttagctccttcgtgcag
ttccccaacgccgctcaggctcactcagccatgggaggagtatctaatcccaccacggac
ttcacctctgacctttcggacttccctgaaacgctgtttaaaggtttcgaacctgacagt
tttcgttcagccaagtctgagctgctctctagcgcgcttcgattgcggcacacgctggac
ttgatggtggtacaagcgaggcaaggcgacggccacttttccacatctccaccgacacct
gaaccgcctcctccaccaagccctgtagtgctgctgaataatctgcgaccgggagcacgc
tacgcctgcctgtgccagagcaccaggggccgacgcgctcgccgctgctttgtgatggcc
gtgctggtggatggcagaatattcgagggcacaggctgtagcaagaagctggcaaagaga
aaggcggcactgagtgccctgcaggcgctcttcaacatcacacaggcacccgaggcgaga
gtgggtatgatcaagcggcctcatttaccccaggactttgcagacgccgtgtttcatttg
gtgatggagaaatacagcgaactgattggctgctccaccctgatgcacgcatgtcacaaa
ggcctggcgggtatcatcatgaccagagggctggatgtgaggcaggctgaagtggtagca
ctggctacaggaactaagtgcattaacggagagtatctgagcgaccagggcctgaccgtg
aacgactgtcatgcagaaatcacagccagacgagcgttactgcgcttcctctactcgcac
ctggagctgcacctcagtaaacgagaggaggacaaggagcagtccatcttcattcgacat
aaagactcatctttcaggctgagagagaacgtcctgttccacatgtacatcagcacatca
ccgtgcggagacgcccgcattaactcaccctacgagctcaccacagacttctcggtgcac
agcaacagaccggtggtgaagaagttccacagccatctgcggagtaagatcgagtcgggg
gaaggcacgctgccggtcaggtgcagatcagctgtacagacgtgggatggagtgatgcag
ggcgagagactcatcacaatgtcctgcactgataagatagccaggtggaacgtgctcggc
ctccagggggcgctgctcagtcactttgtcgagcctgtgtatctgtacagcgtgatggta
ggcagcgtcacacacaccggacacctctccagaacactcaaccaaaggatggagcgtctc
ggctcacttcctgcctgctaccgtcgcaaccagccagtactcagcagtctaagcagcagc
gagtgttggcagcagctcaaggcttcgtgcttcagcatgaactggaccgcaggagacgag
cagctggaggtgatcaacgcctccacgggcaaacgcagagactgcggagctccatcacga
ctctgcaaacgtgcacttttcacacgctggaacagagtctaccgcaaactggtagcgagc
gctccgggttcaagcaccggcccgctgacgtacggcgaggccaagcaggcggcggcgtcc
taccagagcgcgaaggagcagtgggtgcgagcgctgagggaagccgggttggggacgtgg
gttcggaaaccggcggaacaagagctcttcatgctgacggcgtga
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