Ictalurus punctatus (channel catfish): 108273104
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Entry
108273104 CDS
T04658
Name
(RefSeq) inactive rhomboid protein 2 isoform X1
Organism
ipu
Ictalurus punctatus (channel catfish)
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Gene cluster
GFIT
Motif
Pfam:
iRhom1-2_N
Rhomboid
GtrA
Motif
Other DBs
NCBI-GeneID:
108273104
NCBI-ProteinID:
XP_017337615
Ensembl:
ENSIPUG00000014071
UniProt:
A0A2D0S5W7
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Position
12:complement(9216954..9259714)
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AA seq
870 aa
AA seq
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MAFHTCWSLPFGCNTAENTTSEESLHASSWLTALTRCFLNQGQSFVKGKEEVTRMASQQG
EEPIIGQSDCRLKNKKPPSLVIAIPPSEDQERTVMEAQPLRPSEKKSVSMRQSTEALSYS
ETNERRAAFRRQTSLSQSIRRSTAQWFGVGTDCENQQQLWQRKSLRHCSLRYGRLKPQYR
DQQEAASIDLDSPVTHKMPKIVDPLARGRQFRYDDVERPRTPHVAHAPAPQTPGVSSLCS
YTSQRSTHSRFPRRKRESVARMSIRAASNLLRGRPGLHGTQVPRSIPRRSFVRPSWMEED
TVDTADTSDSVFFSKIDAHEDFYSMADDVFESPPLSASLAVDGLVDEAGRYPSFKDISRA
PAATISPALKRGGRIASRVKHFAFDKHKRQYGLGVVGKWLDRQYRRSLSSQVQKQLDGFH
SHRPYFTYWITFVHIVITLLACCTYGFAPVGFAQHTITQLVLRNKGVYESVKYVQQQNFW
IGPGSVDLIHLGAKFSPCIRRDLRIAARMQRDKDEEKESGCCVQNDNSGCVQTLRSGCSE
SLATFIKWNKENVDIIRSSGAVCHQDPRTCQEPASAEPHIWPDDITRWPICTDGGTWNHT
GYTHMDCSIRGRPCCIGTQGRCEIATREYCEFMHGYFHEEATLCSQVHCLDKVCGLLPFL
NPDIPDQFYRLWLSLFLHAGLLHCLVSVVFQMTVLRDLEKLAGWLRISIIYILSGITGNL
ASALFLPYKAEVGPAGSQFGLLACLFVELFQGWQMLEKPWNAFLKLLGLVLFLFFCGLLP
WIDNIAHIFGFLSGLLLSFAFLPYVTFGTFDKYRKRVLIILSLLVYLGLFSSLIVWFYIY
PIDWYWLEYLTCIPFTSKFCERYDNDPIGH
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggccttccatacttgttggtcgctcccttttgggtgtaatacagccgaaaacacgact
tcagaggaaagtctacacgcctcctcctggcttaccgcgcttactcggtgctttttaaac
cagggccagtcctttgtgaaagggaaagaagaagtaaccaggatggcgtcccagcaaggc
gaggagccaattatcggtcagtcagactgtcggttgaagaacaagaagccacccagcctg
gtgattgcaatcccgcctagcgaggatcaagagagaaccgtgatggaggcacagccctta
aggccatcggaaaagaaaagcgtcagtatgcggcagtcgaccgaggcattgtcgtacagc
gagacgaacgagaggagagcggctttccgcagacagacgtctctttctcagagcatccgc
aggagcacagcacagtggttcggtgtcggtacggactgcgaaaaccagcagcagctgtgg
cagaggaagagtctacgccactgtagcctgcgttacggccgcttgaaacctcagtacaga
gaccagcaggaagcagcaagcatcgacctggactcgcccgtcactcacaagatgccaaag
attgtggaccctttggcccgtggacgtcagttccgttacgacgatgtggaacggcccagg
acgccacatgttgctcacgctcctgcccctcagaccccaggtgtctcctccctgtgctcc
tacaccagccagcgctctactcactctcgcttcccacgtaggaagagagagtccgtggcc
cgcatgagcatccgcgcagcctccaacctactcaggggtcggcccggcctgcacggcacc
caggtgcctcgaagtatcccccggaggagttttgttcggcccagctggatggaggaggac
acggtggacacagcagacacgtccgactcggtcttctttagcaagattgatgcgcatgaa
gacttttactctatggcagatgatgtgtttgagtccccacccctctccgcttcattggcc
gtggatggtttggtcgatgaagcgggacgctaccccagcttcaaggatatcagccgagct
ccagctgcaacgataagccccgcccttaagcgcggaggccgtattgcgtcccgagtaaag
cactttgccttcgataagcacaagcgtcagtacggcctgggcgtagtggggaagtggctg
gaccggcaataccggcggagcctgagcagccaagtgcaaaaacagctggatggtttccac
agccacagaccttattttacctactggatcacgtttgtgcacatcgtcatcactctgctg
gcctgctgtacgtacggcttcgctccggtcggattcgcccagcacaccatcactcaacta
gtgctgaggaacaaaggggtgtatgagagtgtgaagtatgttcagcagcagaatttctgg
atcggcccaggatccgtagacctgatccacctgggagcaaagttttcgccctgtattaga
cgagacttaaggatagccgctcgcatgcaacgcgacaaggatgaggaaaaagagtcgggc
tgctgtgtgcagaatgataactcgggatgtgtgcagacactccggagcggctgctcggag
tcgttggccaccttcattaaatggaacaaagagaatgtggatatcattcgttcctcaggt
gcggtgtgccatcaggaccccaggacatgtcaggagcctgcctcagcagagccacacata
tggcctgatgacatcacgcggtggccaatctgtacagacggaggcacatggaaccacacg
ggttacacgcacatggactgcagcatcaggggtcgtccatgctgcatcgggacccaagga
aggtgcgagatcgccacgcgagagtactgtgagttcatgcatggctacttccatgaggag
gccacgctctgctctcaggttcattgtctggacaaggtgtgtggcctgctgccgtttctg
aacccggacattccggaccagttctaccgactctggctctctctgttcctgcatgcaggt
ctcctgcattgcctggtgtccgtagtcttccagatgactgtactgagagacctggagaaa
ctcgctggctggttacgcatctccatcatctacatcctcagcgggatcacaggaaaccta
gccagtgctctcttcctgccatacaaagcagaggtgggtccagcaggttctcagtttggt
ctgctagcgtgcctgtttgtggagctctttcagggctggcagatgttggagaagccgtgg
aatgccttcctcaagctgctcggccttgttctcttcctgttcttctgtggcctgctgccg
tggatcgacaacatcgcccacatcttcggcttcctcagcggcttgctgctgtccttcgcc
ttcctgccttacgtcaccttcggcaccttcgacaagtatcgcaagcgtgtgctcatcatc
ctgtcactgctcgtgtacttggggctgttctcctcgctcatcgtctggttctacatctac
cccatcgactggtattggctcgagtatctcacctgcatccccttcaccagcaagttctgc
gagcgatatgataacgaccccatcggccactaa
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