Ictalurus punctatus (channel catfish): 108274564
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Entry
108274564 CDS
T04658
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1 isoform X1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108274564
Ion channels [BR:
ipu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108274564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
TRPM_tetra
LSDAT_prok
Ion_trans
Shisa
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
108274564
NCBI-ProteinID:
XP_053541593
Ensembl:
ENSIPUG00000021358
UniProt:
A0A9F7TNA2
LinkDB
All DBs
Position
14:complement(15660038..15678103)
Genome browser
AA seq
1517 aa
AA seq
DB search
MYIRLSYDTKPDNLLHLMVKDWHLELPTLLISVHGGLQNFDLQPRLKQVFGKGLIKAAVT
TGAWILTAGINTGVIRHVGDALKDHCSKSRGKVCAIGIAPWGILESKEDLIGRDVTRPYQ
TMSNPLSKLAVLNSSHSHFILCDNGTFGKYGAEVKLRRQLEKHISLQKINTRQGVPLVCL
IVEGGPNMITVVLESLREEPPVPVVVCDGSGRASDILSFAHKHTENEGTISDDARDQLLV
SIQKTFNYSKNQSQQIFLMIMECMKRRELITVFRLGSEGQQDIEMAILTALLKGTNASAS
DQLSLALAWNRVDIARNQIFVYGHNLPPASAVASATSIVKAKSSPAASQGMAKCRGKWGK
GGKAKADVQEEMDPRKLELLNWVSSLEQAMMDALVLDRVDFVKLLIENGVNIHHFLTIPR
LEELYNTKLGPVNTLNAVVRDVKKGNLPPDYQITLIDIGLVMEYLMGGAYRCNYTRKSFR
SLYNNLYGLKRPKALKLLGMEDDEPNLKGKKKKKKKEEEVDIDVDDPEVSRFQYPFHELI
VWAVLTRRQKMALFLWQRGEEAMAKALVACKLYKAMAHESSVSELVDDIFQDLDNNSKEF
GTLAYELLDQAYKHDEQVAMKLLTYELKNWSNSTCLKLAVAAKHRDFIAHTCSQMLLTDM
WMGCLRVGKNPGLKVIAGIILPPSILLLGFRVGDDTYQGSDDSKCAKDKDDDNKSSRDAT
TEAHSKKGDEEDGSKKLRHVPIGRKIYEFYNAPFTKFWFNTISYLGYLMLYNYIVLVKME
RWPSVQEWLVISYILTLGLEKVRQILMSEPGKLKQKINVWLEEYWNITDLVAISIFLLGL
LLRLQPEPYMGYGRVIYCVDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMIDMLYFVVIML
VVLMSFGVARQAILHPDEEPTWRLARNIFYMPYWMIYGEVFADSIDRKTRIDIYAMEINP
PCGDNKYDEDGKKLPPCIPGAWLTPAIMACYLLVANILLVNLLIAVFNNTFFEVKSISNQ
VWKFQRYQLIMTFHDRPVLPPPLIIFSHIYIIIRQICCCCCKKKEGELDEKDKGLKLILN
SEELRCLYEFEEQCVEEYFREKEDEQQSSNNERIRVTSERVENMSMHLEEVNERENNMKA
SLQTVDLRLAQLEDIYSRMMKALEKLAGIDHSELKRTHSRTSTVSGFSSLLRTGSINSND
GYNPYCFYMDDCPASDEKNWAKSSQLIVANVKKPPNTTTLNPNDYGLNLEVGVPVVRVSS
NSCENTWIPPCEKTAESIDQVEEAKTAFEASPSLVQRSRSTSLFSATAREDLIHRAKEPN
SLQEGIVRSATMRRWSAGSEYKVQPNLTGQPPLDIHIIKLTEKKEANKSERHLRPQIPNI
LSTEIRTQEEEKEGQRGRSDITQVDRKENGSEESLNMKGNTEVRERDPTETDEIWRNAVE
DRRMNVHGDIPDSFHLLVPEERMFPPGRSKSWNTKCRKTLRASADKPRGSSSESSLACGS
SLERSGEKFGKVSGKEE
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcagactatcttatgacaccaaaccagacaacttgttgcacctaatggtgaaa
gattggcatctagagctgcccacactcctcatttctgttcatggaggcctccagaatttc
gacctgcagcccagactaaagcaggtctttggcaaaggcctaattaaagctgcagtgacc
actggagcatggatcctcactgcaggaattaacacaggtgtgatccgccatgttggagat
gcgttgaaagaccattgctctaaatccagagggaaggtctgtgccattgggattgcacca
tggggaatcctggagagcaaggaggatctcattggaagagatgtgaccagaccttaccag
acaatgtccaacccactgagcaagctggctgttctcaacagcagccactctcatttcatc
ctatgtgataatggcacatttgggaagtatggggcagaggttaaactgcgtagacagctg
gagaagcacatctctctgcagaagattaacacccgtcagggagtgccactagtatgcctg
atcgtagaaggaggcccaaacatgatcactgtggtgctggagagcttgcgcgaggaaccg
cctgtgcctgtagtggtgtgtgatggcagtggccgagcctcagacatcctctcctttgcc
cacaaacacacagagaatgaagggacaataagtgatgatgcccgagaccagctgctggtc
agcattcagaagacctttaactacagcaagaatcagtcacagcaaatcttcctcatgata
atggagtgcatgaagagaagggagctgataacagtctttcgactgggttcagaaggacag
caggacattgagatggccattttaacggctttactgaaaggtacaaatgcctcagcctca
gatcaattgagcttggctcttgcctggaatcgggtggatatagcacgcaaccaaatcttt
gtttatggacacaacctgccacctgcaagtgcagtagctagtgccacatccatcgtgaaa
gccaagagctcccctgcagcctcacagggcatggctaagtgcagaggcaagtggggcaaa
ggggggaaggccaaggcagatgttcaagaggaaatggatcctaggaagctagaattactc
aactgggtgagctcactggagcaggcaatgatggatgcactggtgctggaccgagtagat
ttcgttaagctgttgattgaaaatggggtcaacattcaccatttcctcaccatcccacgg
ctagaggagttatataacacgaaactgggacctgtcaacacattgaatgctgtagtccga
gatgttaaaaaaggtaaccttccaccagactatcaaattacactaattgacattggcctg
gtgatggagtaccttatgggcggggcctatcgctgtaactacacaagaaaaagtttccgc
tctctctacaacaacctttatggtcttaaaaggccaaaggctctaaaacttcttgggatg
gaggatgatgaaccaaatctgaaaggaaagaagaaaaagaagaagaaagaggaggaagtg
gacattgatgtggacgaccctgaagtcagtcgtttccaatacccattccacgagctgata
gtttgggccgtgctgacgagaaggcagaagatggctctgttcctgtggcagaggggagag
gaggccatggctaaggccttggtggcctgtaagctttataaagccatggcccatgaatcc
tctgtcagtgagttggtggatgacatatttcaagatctagataacaactccaaggagttt
ggaactttggcctatgagcttctggatcaggcatacaaacatgatgaacaggtagccatg
aagctgctgacctatgagcttaagaactggagtaactccacctgtctgaaactagctgtg
gctgccaagcacagagacttcattgcccacacatgcagccagatgctccttactgacatg
tggatgggttgcctgagggttggaaaaaaccctggcctcaaggtgattgccggcatcatc
cttcctccttcaatccttctcctgggtttccgtgtgggtgatgacacctaccaaggctct
gatgacagcaaatgtgccaaggacaaggacgatgacaacaaatccagcagggatgccact
acagaggcacattcaaagaaaggtgatgaagaagatggcagtaagaagctgagacatgta
cccattggaaggaagatatatgaattctacaatgctccattcactaagttttggtttaat
acgatatcataccttggctatcttatgctgtacaattacattgtcctggtgaagatggaa
cgttggccatcagtgcaagagtggttggtcatttcctacatactgacacttggcctagag
aaagtaagacagattctgatgtcagaacctggtaaactcaagcagaagattaacgtgtgg
ttggaagagtactggaacatcacagacctggtggccatctctatattcctgctgggtctc
ctcctcagactacagcctgaaccttacatgggctacggccgggtaatatactgtgtggac
atcatcttctggtacatccgtgttttggatatttttggggtcaacaagtacctcggacct
tatgtcatgatgatcggcaagatgatgatcgacatgttgtactttgtggtgatcatgttg
gtggtcctcatgagctttggggtagcacggcaagccatcctccacccagatgaagagccc
acctggcgattagcccgaaatattttctacatgccctactggatgatctatggagaagtg
tttgcggactcaatagaccgtaagactagaattgatatttatgccatggaaatcaacccc
ccctgtggagataacaagtatgatgaggatggaaagaaactccccccctgtattcctggt
gcctggctcactccagctatcatggcctgttatttgctagtggctaacatccttcttgtc
aacttgcttattgctgtcttcaataacaccttctttgaggtgaagtccatctcaaaccag
gtgtggaagttccagcggtatcagctgatcatgactttccatgataggccagtgcttcct
cctcctctcatcatcttcagccacatttacatcatcatcagacaaatctgctgctgctgt
tgcaagaaaaaagagggagagctggacgagaaggacaaaggactgaagcttatcctgaat
tctgaggagctgaggtgcctgtatgaatttgaggagcagtgtgtggaagagtacttcaga
gagaaagaagatgagcagcagtcctcaaataatgaaagaataagggtgacatctgaaagg
gtggaaaacatgtccatgcacctggaggaggtcaatgagagagagaacaatatgaaagct
tctttgcagacggtggatctgaggctggcccagctggaggacatctattctcgcatgatg
aaggctttggagaaactggcaggaattgaccacagtgaactgaagaggacacactcacgg
acatccactgttagtggtttctcatctcttctccgcactggcagcattaacagcaatgat
ggatacaacccttattgcttctatatggatgactgtccagcttctgatgagaagaattgg
gccaagtcaagtcaactaatagtggcaaatgtaaagaagccaccgaacaccacaactctc
aatccaaatgattatggactgaatttggaggtgggtgttccagtagtaagggtcagttca
aattcatgtgagaacacctggatcccaccttgtgagaagacagctgaatctatagatcag
gttgaagaggccaaaacagcatttgaagcttcaccatctttagtccaaaggtctagaagc
accagcttgttcagtgcaactgccagagaagatttaatacatagagccaaagagcctaat
tctcttcaagaagggattgtcagatctgcaactatgaggcggtggagtgctggctctgag
tataaagtgcagcctaatcttactggccagccacctctagacatccacattatcaaactg
acagagaaaaaagaagcaaataaatctgagcgtcatctgagaccacaaattccaaacatt
ctcagcacagagataagaactcaagaagaagaaaaagaaggccagagaggaaggagtgat
attacacaagtggacagaaaagagaatggctcagaggaaagtctaaatatgaagggtaat
acagaagtaagagaaagagacccaacagagacagacgaaatatggagaaacgcagttgaa
gatagaaggatgaacgtgcatggagatattcctgactcttttcatcttctggtacctgaa
gagagaatgtttccaccaggaagatccaagagctggaacacaaaatgtcgcaaaaccttg
agggcaagtgcagacaagcctcgaggctccagcagtgagagtagccttgcatgtggaagt
tcccttgagaggtctggggaaaaatttgggaaagtgtcagggaaggaggaatga
DBGET
integrated database retrieval system
