Ictalurus punctatus (channel catfish): 108276369
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Entry
108276369 CDS
T04658
Symbol
sars1
Name
(RefSeq) serine--tRNA ligase, cytoplasmic
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108276369 (sars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ipu01007
]
108276369 (sars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108276369 (sars1)
Enzymes [BR:
ipu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
108276369 (sars1)
Amino acid related enzymes [BR:
ipu01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
108276369 (sars1)
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108276369 (sars1)
Prokaryotic type
108276369 (sars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
NOD
Motif
Other DBs
NCBI-GeneID:
108276369
NCBI-ProteinID:
XP_017343469
Ensembl:
ENSIPUG00000018281
UniProt:
W5UA97
LinkDB
All DBs
Position
15:135971..157135
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AA seq
515 aa
AA seq
DB search
MVLDLDLFRTDKGGDPEIVRETQRKRFKDVSLVDKLVEADKEWRKCRFIADNLNKAKNLC
SKSVGEKMKKKEPVGDDDTLPEEVQSLETLTAEILSTLTVTQIKKVRTLVDEAIKKTDDE
RLKLEVERFESLREIGNLLHPSVPISNDEDADNKVERTWGDCTVQKKYSHVDLVVMVDGY
EGEKGAIIAGSRGYFLKGPLVFLEQALINYALRVLYSKNYTILYTPFFMRKEVMQEVAQL
SQFDEELYKVIGKSSEHSDDTSVDEKYLIATSEQPIAAFLRDEWLKPEDLPIRYAGISTC
FRQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHNNKSWEMFDEMITTAEDFYQSLGLPYR
IVNIVSGSLNYAASKKLDLEAWFPGSQAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKA
EFVHMLNATMCATTRVICAILENYQTAEGIIIPEPLREFMPPDLTEIIKFVKAAPIDQEL
SKKQKKQHEGGKKKKLQANDTDLQNKVENMSVSNS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggttcttgacctagacctgttccggacagataaaggcggcgatccagaaattgtgaga
gagacgcaacggaaaaggtttaaagatgtgtccttggtggataaactcgttgaagcagat
aaggaatggcggaaatgtcgcttcattgcagacaaccttaacaaggcaaagaatttatgc
agcaaatctgttggtgagaaaatgaagaagaaggagccagttggagatgatgacaccctc
ccagaggaggtccagagcctggagacactcacagcagagatattatcaacactgaccgtg
actcagattaaaaaggttcgaacattggtggatgaagcaattaaaaaaacagacgacgag
cggttaaagctggaggtggagcgctttgagtccctgagagagattggcaacctccttcac
ccctctgttcccattagcaatgatgaggatgctgataataaagttgagcgcacctggggt
gactgcacagtgcagaagaagtactctcacgtggatctggttgtcatggtggatggatat
gaaggagagaaaggtgccatcattgcaggaagcagaggatatttcttgaagggacctcta
gttttcctggagcaggctttgattaactatgccctgcgggtcctttacagcaagaattac
acgatcctctatacacctttcttcatgcggaaagaggtcatgcaggaagttgctcaactc
agccagtttgacgaggagctatacaaggttattgggaagagcagtgagcattctgatgat
acatcagtggatgagaagtatttgattgccacttcagaacagcccatagcagccttcttg
agagatgagtggcttaagccggaggaccttcccatacgctatgctggcatttctacctgc
ttcagacaggaagtgggttcccatggccgagacacccgtggcatatttagggttcaccag
tttgaaaagattgaacagtttgtgtatgcctcacctcataacaacaagtcatgggagatg
tttgatgagatgatcacaactgcagaagatttctatcagtccctaggattaccctaccgc
attgttaacattgtctctggttctttaaactatgcagccagtaagaagctggatttggag
gcttggttcccaggatctcaggcttttagggagctggtgtcttgctccaactgcacggac
tatcaggctcgccgcttacgtatacgctatggccagacaaagaagatgatggataaggct
gagtttgtgcacatgctcaatgcaaccatgtgtgcgactacccgtgtaatctgcgctatt
ctggagaactaccagactgcagagggcataatcattccagagccactcagagagttcatg
cctccagacttaacagaaataatcaagtttgtgaaggcagctcctattgaccaagagctg
tcaaagaagcagaagaaacaacatgagggaggaaagaagaagaagctgcaagccaatgac
actgacttacaaaacaaagtagagaacatgtcagtgagcaactcctaa
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