Ictalurus punctatus (channel catfish): 108276383
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Entry
108276383 CDS
T04658
Symbol
nr4a1
Name
(RefSeq) nuclear receptor subfamily 4 group A member 1 isoform X1
KO
K04465
nuclear receptor subfamily 4 group A member 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108276383 (nr4a1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108276383 (nr4a1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ipu03310
]
108276383 (nr4a1)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys4 nerve growth factor IB-like
108276383 (nr4a1)
Nuclear receptors [BR:
ipu03310
]
4. Nerve growth factor IB like
4A. Nerve growth factor IB like receptor
108276383 (nr4a1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
108276383
NCBI-ProteinID:
XP_017343497
Ensembl:
ENSIPUG00000011564
UniProt:
A0A2D0SLB2
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Position
15:complement(22464610..22472208)
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AA seq
567 aa
AA seq
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MTCVQSQHGVQPYESMLYCSELMNPDFTSRLAMDVSEQREQLSTSSLPSITSLVGGYGGE
FDTYSCPLATASTCTGATSGQDSFKLDDLQVYGCYPGTFTFSYMDDALSTSGGSNCFGSP
VSAPSPSTPGFQSVPSWDGAYGSCSPDAGCWGSEKTPLPQAPSFFTFGPVSAEDMSPLGQ
LQQHQLPDQDPFSLSHQNHPLRLDHNSRDSSVLVDNQLSPKIKSPTGNEGCCAVCGDNAS
CQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKE
VVRTDNLKGRRGRLPSKPKPVTESASALPSGNIITSLVNAHMESNPAITKLDYSKYQQTV
ASVSEKEDASDIQQFYDLLTGSMSVIRKWAESIPGFTAFSKEDQDLLFESAFVELFILRL
AYRSHPETDKLIFCNGVVLHRMQCVRGFGEWIDSIMEFSQNLHRLNLDVASFSCLATLVI
ITDRHGLKEPKRVEDIQNHLITCLKDHVATIVSEAARCNYLSRLLGKLPELRTLCTQGFQ
RIFYLKLEDLVPPPPIVDKIFMDTLPF
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgacctgtgttcaaagccaacatggagtccagccttatgagagcatgctctactgctca
gagcttatgaaccctgacttcacctccaggttggccatggacgtgagcgaacagcgggag
cagctctccacatcctctctgccgagcatcacctctctggtgggaggctacgggggagaa
tttgatacctactcctgcccacttgccactgcatcaacctgcaccggtgccacctcgggc
caggactccttcaagctggacgacctccaggtttatggctgctaccccggcacattcacc
ttcagctatatggacgatgcgctgtctacgtcaggtggctcgaactgttttggcagcccc
gtctcggctccttcaccctcaaccccgggtttccagtcagtgccttcctgggatggggcg
tatggatcctgctcccctgacgcaggctgctggggttcagagaagacacctcttcctcag
gccccttcctttttcacttttggacctgtttcagcggaagacatgtctcctctagggcag
ctgcagcagcatcaacttcctgatcaagatcccttttctctgagccatcagaaccatcca
ctcaggctggatcacaacagcagggacagttcagtcctggtggacaatcagctgtctccc
aaaatcaagagtccaacaggaaatgaagggtgctgtgcggtttgtggggacaacgcctcc
tgccagcactatggagtgcgcacgtgtgagggctgcaagggcttctttaagcgtacagta
cagaaaaatgccaagtacgtatgcctagctaataaagactgtccagtggacaaacggcgg
cggaacaggtgccagttctgtcgctttcagaagtgcctggcagtaggaatggtgaaagaa
gttgtaagaacagacaacctaaagggcagaaggggtcgtttgccttctaagccaaaacca
gtcacggaatcagcatctgctttgccttctggaaacatcatcacctctcttgtgaatgct
cacatggagtcaaacccagccatcacaaaactggactactcaaagtatcagcagacagtg
gctagcgtgtctgaaaaggaggacgccagtgacatccagcagttttacgacctgctgacc
gggtctatgagcgtgatcagaaagtgggcagaaagcatcccaggattcactgccttctct
aaggaggaccaggacttgctcttcgaatcagcctttgtcgagctcttcatattacgacta
gcttacagatcacacccagagacggacaaactgatcttctgcaacggcgtggttcttcac
cgcatgcagtgtgtgcggggatttggcgagtggatcgactccatcatggaattctcgcag
aatttgcatcgtctgaacctggacgtggcgtcgttctcctgtctcgccacactagtcatt
ataacagatcgacacggcctgaaggaacccaaacgggttgaggatatccagaaccatcta
ataacatgcctcaaagaccacgttgcgacgattgtctcagaagcagcacgctgcaactac
ctgtcccggctgctggggaaactgcccgaactcaggacactgtgtactcaaggctttcag
cgcatcttctaccttaaactcgaagaccttgtcccacctcctccgattgtggataagatc
ttcatggacacgttgcctttctga
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