Ictalurus punctatus (channel catfish): 108276420
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Entry
108276420 CDS
T04658
Symbol
nfatc2a
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2 isoform X1
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04020
Calcium signaling pathway
ipu04148
Efferocytosis
ipu04218
Cellular senescence
ipu04310
Wnt signaling pathway
ipu04370
VEGF signaling pathway
ipu04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108276420 (nfatc2a)
04370 VEGF signaling pathway
108276420 (nfatc2a)
04020 Calcium signaling pathway
108276420 (nfatc2a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108276420 (nfatc2a)
09143 Cell growth and death
04218 Cellular senescence
108276420 (nfatc2a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
108276420 (nfatc2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108276420 (nfatc2a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
108276420 (nfatc2a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
DUF3971
Motif
Other DBs
NCBI-GeneID:
108276420
NCBI-ProteinID:
XP_017343561
Ensembl:
ENSIPUG00000019074
UniProt:
A0A2D0SM33
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Position
15:complement(1839195..1867416)
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AA seq
872 aa
AA seq
DB search
MSSFYEKDSSELGLSGELTQMSSEELEFEYLFNYEPQDSDFPSGDPKDDTNISIHTHPYP
LDEASPYTESSTEALSGYEHLEAKNYVGHVRSGPQAVSPRIEITPSREHHSHGHNSLHDP
LVNASPRPTLTVPGLDCAIYREPQCLSPASSNSSTSWHSETYSPFASPCVSPGSGQVVAG
ELCPRFQNIHTGSPRTSPGTSPHTSLAEENCSSPRPSSRSTSPQGKRTYDMYRNPNLVAA
ARSRSPSPHGSHDDRHSSTQYGSNNLTEVVNGFGPGSVPTKIVRTNQPAYTVYPDGHGES
YLLEQDIKTKAEPYFVIPSIWPKQLVPGMCSIPITSLPPLEWPLPSRTDQYELHIEVQPK
PHHRAHYETEGSRGAVKAPTGGHPVVQLHGYRGKEPLGLQIFIGTADERILKPHAFYQVH
RITGKTVTTTSYEKIINSTKVLEIPLEPKNNMKAIIDCAGILKLRNADIELRKGETDIGR
KNTRVRLVFRIHIPQPGGQYVSLQVASHPIECSQRSAHELPMVEKQDMDRCSVLGGQQMI
LTGQNFSADSKVIFTEKTHDGQQIWELEATVDKDKSQSSMLFIEVPPYRDPAICHPAKVN
FYVINGKRKRSQPQHFTYIPLPVSSIKTEPLDEYESGQIGYMMSQTMGVSPHSYYHHNPR
SVLSSDNGLLANMASCHQNHSGISPSEPCFQQHIVYPRAEKNVGSSLFIQTGVMVPEAHR
SVLVHTGSPAKSSHLIGQHPVIQFSPTNHHLLRGAENITPPAQEHQNLYCEGYSPQGAQT
AVASHSPAPAQAHQTQHCPTVIQQQPYTNRLPKDRSPPGQVHPQRCSSAEEPRASLPGRV
TVKQENLDQAYLDDVNEIIRKDLTGVHGRAQT
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgagctctttttacgaaaaggacagctctgagttagggctctctggagagctgactcaa
atgagctctgaggagctggagtttgaatacctgtttaactatgagccacaggacagcgac
tttccttcaggagatcctaaagatgacaccaatatctccatacacacacacccgtacccc
ttggacgaggcttccccctacactgaaagcagcaccgaggctctttctggctatgagcat
ctggaggctaaaaattacgtagggcacgtaaggtctggtccacaagctgtgagtcccagg
attgagatcacgccatcacgtgagcatcacagccatgggcacaactcactccatgacccg
ctggtgaatgccagccccaggcctactctcactgtgcccggtctggactgtgccatctac
cgtgagcctcagtgcctgagcccagccagcagcaactcctcaacctcgtggcactctgag
acttactcgccattcgcatcaccctgtgtgtccccaggtagtgggcaggtcgtggctgga
gagctgtgtcctcgcttccaaaacatccacacaggctcccctcgcaccagcccaggcaca
tcaccccacaccagcctggctgaggagaactgttcatccccaaggcccagttctcgctct
acatcgcctcagggcaaacgcacctacgacatgtacaggaacccaaatctggtagctgcg
gctcgatcacgaagtccttcgccacacggcagccatgatgaccgtcattccagcacccaa
tatggctccaacaacctaacagaggttgttaacgggtttgggccggggtcagtacccaca
aagattgtgagaaccaaccagccagcctacacagtatacccagacggccatggagagagc
tacctgttggagcaagacatcaagaccaaagcggagccatactttgtcattccatcaatc
tggcccaagcagttggtgcctggaatgtgcagcatccctattacctctctgcctcctctg
gagtggcctctgcccagccgcacagaccagtatgagctgcacatcgaggtgcagcccaaa
ccacaccacagggcacactacgagactgagggcagccggggggctgttaaagcacctaca
ggggggcacccagtggtccagctacatggatacagaggcaaagagccactggggctgcag
atcttcattggcacagcagatgagcggatcctgaagccccacgcgttctaccaggtgcac
cgcatcacaggcaagacggtgaccacgaccagctatgagaagataatcaatagcacgaag
gtgttagagatccctctagagccaaagaataacatgaaagcaataatcgactgcgctggg
attctgaagctcaggaatgctgatatagagctgcggaaaggcgagacagacatcgggcgg
aagaatacccgtgtgcgactggtgttccgcattcacattccccagccagggggtcaatac
gtgtctctccaagtggcctcacatcccattgagtgttcccaaagatctgcacacgagctg
cccatggtggagaagcaggacatggacaggtgttcagtgctcggaggtcagcagatgatc
ctgactgggcagaatttcagtgctgactcaaaagttatttttactgagaagacccatgat
ggacagcaaatttgggagttggaagccacagttgacaaagacaaaagccagtctagcatg
ctgtttattgaagtgcctccttatagagacccagccatctgccatcctgctaaagtgaat
ttctatgtgatcaatgggaaacgaaaacgcagtcagcctcagcacttcacgtatatacct
cttccagtttcttccatcaaaacagaaccactggatgaatatgaatctggacaaattgga
tatatgatgtcccagaccatgggagtttccccacactcctattaccatcacaacccccgt
tcagtcctcagctcggataatggcttacttgccaacatggcttcctgtcaccagaatcat
tcaggaatctccccttcagaaccctgctttcagcagcacattgtgtatccccgtgctgag
aagaatgtagggtcaagcttattcatccaaacgggagtcatggtgccagaagcccatcgt
tctgtcctggtccatactggttccccagccaagtcctcccacttgattggtcagcatccc
gtcattcagttttcccccaccaaccatcacttgttaagaggggcggaaaatattactcca
ccagcccaggaacatcagaacctctactgtgagggctacagcccgcaaggagcccagaca
gcagtggcttcacattctccagctccagcacaagcccaccaaacccagcattgccccacc
gtcattcagcaacagccctacacaaacaggcttccaaaggacaggtcccctcctgggcaa
gtccatccacaaagatgttcctctgctgaggaaccgagagcttctcttcctggacgtgtc
actgtcaagcaggagaacttggaccaggcctacctggatgatgttaatgagatcataagg
aaggatctgacaggagtgcacggccgagcacagacataa
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