Ictalurus punctatus (channel catfish): 108277950
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Entry
108277950 CDS
T04658
Symbol
gabbr1a
Name
(RefSeq) gamma-aminobutyric acid type B receptor subunit 1 isoform X1
KO
K04615
gamma-aminobutyric acid type B receptor
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108277950 (gabbr1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ipu04030
]
108277950 (gabbr1a)
G protein-coupled receptors [BR:
ipu04030
]
Metabotropic glutamate receptor family
GABA
108277950 (gabbr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
7tm_3
Peripla_BP_6
Sushi
UPF0242
TMF_TATA_bd
DUF6377
Motif
Other DBs
NCBI-GeneID:
108277950
NCBI-ProteinID:
XP_017346519
Ensembl:
ENSIPUG00000000932
UniProt:
A0A2D0SV08
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All DBs
Position
17:complement(17666441..17729591)
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AA seq
988 aa
AA seq
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MVQLLFLVISNVLPTLIASMHNSTTGGCAIIRPPRDGGIRYRGLTQEQIRSVQILPVDYE
IEYICRGNRVIVGPKVRKCLPDGTWTDMDQQSRCLFLCPHWWTSLENGRVTVQPPGPPVE
GTVLHYSCHAGFQLEGRNVSNCTKQGNWDSPKPLCVYDRNYTGKKKLYIGALFPMSGGWP
GGQACLPAAQMALELVNNRTDILPDYELELIYYDSMCDPGEATKLLYDLLYTEPIKIVLM
PGCSSVSTLVAEAARMWNLIVFSYGSSSPALSNRQRFPTFFRTHPSATLHNPTRVRLFQK
WNWSKIATIQQTTEVFTSTLDDLEQRVKEAGIEISVRQSFLTDPAVAVKNLKRQDARIIV
GLFYETEARKVFCEVYKEKLYGKKYVWFLIGWYADNWFKIKDPAINCTMEQMTEAVEGHV
TTEIVMLNPETVRGASNLTSQEFLAQLMSRLGGKNPEETGGFQEAPLAYDAVWALALALN
KTVAPLRAKGRRLEDFNYNNQDIKAEIYRALNTSSFEGVSGHVVFDAQGSRMAWTLIEQL
QGGSYKKIGYYDSTKGNLSWYGNDKWIGGDPPRDQTVVLEEFRFLSQKLFVSVSVFAGLG
IILGIVCLTFNIYNSNIRYIQNSQPYLNNITAVGCVLALAAVFPLGIDGLHVDRSRFPVV
CQFRLWLLGLGFSLAYGSMFTKIWWVHTVFTKKDEKKDKRKHLEPWKLYATVGVLLAIDV
LSLMIWQIVDPLHITLEKFTKEDPKGDLDFLIQPVLEHCSSEKMNTWLGVVYGYKGLLLL
LGIFLAYETKSISTEKINDHRAVGMAIYNVSVLCMITAPVTMILSSQQDASFAFASLAIV
FSVYITLVVLFVPKMRRLIMRGEWQSEQQDTLKTGSSTNNNDEEKSRQLERENRELQKII
QEKEERVTELRNQLAERQALRARKPASCQNQNQNHSVPLLASSEPPGYSSGTEHSVPPSF
SNNSTLYHGEGKLSRNHCHNSRLPLLYK
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctgttgtttcttgtaatttccaacgtgcttcccacacttattgcatccatg
cataattcaacaactggagggtgtgccatcattcgccctcctagagatggagggattcgt
tacagaggactgacacaggagcagattcgcagtgtgcagattttgcctgtagactatgag
attgaatacatctgccgggggaacagggtgattgtaggcccgaaggtgcggaagtgtctc
cctgatggcacgtggacagatatggatcagcagagcagatgcttgtttctgtgtcctcac
tggtggacgtctttggagaatggcagagtgacagtgcaaccccctggacctccagtagaa
ggcactgtgctccattacagttgtcacgctggcttccagttggagggcagaaacgtttcc
aactgcaccaagcagggcaattgggactcgcccaaaccactgtgtgtttatgacagaaat
tatacagggaagaagaagctgtacatcggcgcgctgttccccatgagcggaggatggcct
gggggacaagcatgtctgcccgccgcgcagatggcactggagctcgtcaacaaccgcact
gacatcctgcccgactatgaactcgagctcatctattacgacagcatgtgtgacccaggg
gaagccacgaagctcctgtacgacctcctctacacagagccgataaaaatcgtcctgatg
ccagggtgcagctctgtttctacactagtggctgaagcagctcgcatgtggaaccttata
gtgttctcctatggctccagctctccagcactgtccaacaggcaacgttttccaacattc
ttccgcacacatccctctgcgacgctgcataaccccacacgagtgcgcctctttcagaag
tggaactggagcaagatcgccaccatccagcaaacaacagaagtcttcacttcgacgctg
gatgatctggagcagagggtgaaggaagctggaatagagataagcgtgagacagagtttc
ctcactgatcccgccgtggctgtcaagaacttgaagcgtcaagatgccaggatcattgtt
ggcctattctatgagactgaagcaagaaaagtcttttgtgaggtctataaggagaaactc
tatggaaagaagtatgtctggttcctcattggctggtatgcagacaactggtttaaaatc
aaagacccagccattaactgcactatggagcagatgacggaggctgtggagggacacgtc
actacagagatcgtcatgctgaaccctgagactgttcgtggtgcctccaacctgacttcc
caggagtttctggctcagcttatgtctcgtcttggtgggaagaaccctgaggagacaggg
ggttttcaagaggctcccttggcatatgatgcagtgtgggctcttgctttggctcttaat
aagacggttgcaccgctacgagctaaaggaagaagactggaagactttaattacaacaac
caggacatcaaagcggagatatatcgggctcttaataccagctcatttgaaggagtatca
ggccatgtagtcttcgatgctcagggatccagaatggcttggacactcatagaacaactg
caaggtgggagttacaagaagattggatattatgacagcacaaaaggcaatctttcgtgg
tacggaaatgacaagtggataggcggagaccctccaagagatcagacggtggttttagaa
gaatttcgcttcctttcccaaaagctgtttgtttcggtatctgtgtttgctggcctggga
atcatcctgggcatcgtttgtctcacattcaacatctacaacagcaacattcggtacatc
cagaactctcagccatacctgaataacattacagccgtaggttgtgtacttgccctggct
gctgtttttccactgggcattgacggtcttcatgtagacagatctcggtttcctgtggtg
tgtcagttccgcctgtggctgctggggctggggttcagtttggcttatggcagcatgttc
actaagatttggtgggttcataccgtgttcactaagaaggatgagaaaaaagacaagagg
aagcatttggaaccctggaagctctacgcaacagtaggagttttactggctattgacgtc
ctgtctctgatgatctggcagattgttgaccctttgcacattacattagagaagttcact
aaagaagatcctaaaggagatctggattttttgattcagcctgtactggaacactgcagc
tcagagaagatgaacacatggctcggagtggtgtatggctataagggcctgctcctgctg
ctgggcatcttcctggcctatgagacaaaatccatctccactgagaagattaatgaccac
cgagctgtcggcatggctatctacaacgtgtctgttctatgtatgatcacagcacctgtg
acgatgattctctcctctcaacaggatgcctcttttgcctttgcctctctggctatagtg
ttctccgtctacatcactttggtggtgctctttgtgcccaagatgcgccgtttgatcatg
cgtggggagtggcagtctgagcagcaggacacgctgaagacgggatcatctaccaataac
aatgatgaagaaaaatcacggcagcttgagagagagaatcgagagctccagaagatcatt
caggagaaagaggaacgcgtaacagaacttcgtaaccaattagcagaacgtcaggctctc
cgggctcggaaaccagcatcttgtcagaaccaaaaccagaaccatagcgtcccccttctg
gcttcatctgagcctcctggatactcatctggcacagagcactcggtgcctccttccttc
tctaacaactccaccctctaccatggagaagggaagcttagccggaatcactgccacaac
agccggctgcctcttctctacaaatga
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