Ictalurus punctatus (channel catfish): 108278075
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Entry
108278075 CDS
T04658
Name
(RefSeq) uncharacterized protein LOC108278075 isoform X1
KO
K12799
apoptosis-associated speck-like protein containing a CARD
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04217
Necroptosis
ipu04621
NOD-like receptor signaling pathway
ipu04623
Cytosolic DNA-sensing pathway
ipu04625
C-type lectin receptor signaling pathway
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
108278075
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108278075
04623 Cytosolic DNA-sensing pathway
108278075
04625 C-type lectin receptor signaling pathway
108278075
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108278075
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Gene cluster
GFIT
Motif
Pfam:
CARD
MSP7_C
Motif
Other DBs
NCBI-GeneID:
108278075
NCBI-ProteinID:
XP_017346711
UniProt:
A0A2D0SW19
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Position
17:25952203..25959274
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AA seq
203 aa
AA seq
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MFLFCLIVMETVRKNKVFLIDTLSTDASVVLQHVQSDSIITRRDYNNLNQPNHTQEKIII
NLLDTVMNRGDETCQKFLKLLEKKELQENFPQLKKLFTPDQTSAERERGPDMPHVKKQSK
GAEFVDRHRDTLIQRISSVMEIADRLLTKNMISTEMYSTVSAAATPQHKMRTLYGFLNSG
AVKEEVYQILREKQPYLMKDLEG
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgttcttattttgtcttatagtcatggagactgtgcgtaagaacaaggtctttctcatc
gacactctgtccactgatgccagcgtcgttttacagcacgtccagagtgacagcatcatc
accaggcgtgactacaacaatcttaaccagcccaatcacacacaggagaagatcatcatt
aaccttctggatactgtgatgaacaggggtgatgagacctgtcagaaatttctgaagctg
ttggagaaaaaagagcttcaggagaatttccctcagctgaagaagctcttcacccctgat
caaacatcagcagagagagagagaggtccagacatgccacatgtgaaaaaacagagcaaa
ggtgctgagtttgtggatagacacagagatacgctcatacagagaatttcttcagtaatg
gagatagcagatcgtctcctaaccaagaacatgattagtactgaaatgtacagtacagtc
agtgcagcagctacgccgcagcacaaaatgaggaccttgtacggatttctcaactccgga
gctgtgaaagaagaagtttatcaaatcctgagggagaagcaaccttatttaatgaaggat
ctagagggttaa
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