KEGG   Ictalurus punctatus (channel catfish): 108279793
Entry
108279793         CDS       T04658                                 
Name
(RefSeq) smoothened homolog
  KO
K06226  smoothened
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    108279793
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:ipu04030]
    108279793
G protein-coupled receptors [BR:ipu04030]
 Frizzled / Smoothened family
  108279793
SSDB
Motif
Pfam: Frizzled Fz Dicty_CAR
Other DBs
NCBI-GeneID: 108279793
NCBI-ProteinID: XP_017349767
Ensembl: ENSIPUG00000023084
UniProt: A0A2D0T4D0
LinkDB
Position
19:complement(22808467..22822617)
AA seq 841 aa
MNPKVQIVVVLLLSLCKMSSSSIVGRFGMLWVWVSTVMVSQAVMLHKNESMFNDFCKKTT
TCEVLKYNTCLGSPLPYTHTSLVLAEDSETQEEAFEKLAMWSGLRNAPRCWAVIQPLLCA
VYMPKCENGKVELPSQTLCQATRRPCSIVEQERGWPNFLKCENTDKFPLGCQNEVQKLKF
NTSGQCEAPLVKTDIQASWYKDVEGCGIQCDNPLFTEEEHSDMHDYIAIFGSITLLCTFF
TLATFLADWKNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARKEIVCKSDNTMRLGEPS
STETLSCVIIFIIVYYSLMSGVIWFVMLTYAWHTSFKALGTTHQPLSGKTSYFHLVTWSI
PFILTVAILAIAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGVVLTVGGYFLVRGVMTLF
SIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVFITFGCHFYDFFNQAEWERSFREF
VLCEANVTIAHQTKKPIPECTIKNRPSLLVEKINLFSMFGTGIAMSTWVWTKATILIWKR
TWCRIIGRSDDEPKRIKKSKMIAKAFSKRKELQMDPEKELSFSMHTVSHEGPVAGINFEL
NEPSMEMSSAWAQHVTKMVARRGAILPQDISVTPTGTPVPPPEERNKLWMVEADISPEMM
KRKKKKKKRKKEVRSVAPVEEGVNPRHREFGASAVPRLPKLPAHRSLVANLWERQRQQEE
NVLPGSFPEFRPSCPIPYQERYGGLGYVSSNQPSRELGCNLSNPLTLSQYEGRGQLKQPA
WQSNGHNGVFRYSGHEMPSSVGGGRTGFTAPRSEGRKPVTAPIHSRTNLMEAELMDADSD
F
NT seq 2526 nt   +upstreamnt  +downstreamnt
atgaacccaaaagtccagattgttgtagtattgttgttgtcgctgtgtaaaatgtcctcc
agctccatcgttggtcgatttgggatgctttgggtttgggtcagcactgtgatggtgagc
caggccgtgatgttacacaaaaacgagagcatgttcaacgacttttgcaagaaaacgacg
acgtgtgaagtgttgaagtacaatacgtgtctgggttcgcctctgccgtacacgcacacg
tctctggtgctggctgaagactccgagacacaagaagaagcttttgagaagttggccatg
tggtctggtttgagaaatgctcctcgctgctgggcggtcattcagcctttactgtgtgct
gtttacatgcccaagtgtgagaacggcaaagtggagctgcccagccagaccctttgccag
gcgacccgccgaccctgcagcatagtggaacaggagcgagggtggcccaacttcctgaag
tgtgagaacacggacaagtttcctctcggttgtcagaacgaggtgcagaaactcaaattc
aatacatcaggacaatgtgaagctcctctggtaaaaaccgacatccaggccagctggtac
aaggacgtggagggctgcggcattcagtgtgacaatcccctcttcacggaggaggaacac
tccgacatgcacgactacatcgccatcttcggttcaatcaccctgctttgcactttcttt
acattagcgacgtttcttgccgattggaaaaattccaatcgctacccggctgtaatcctc
ttctatgtcaatgcctgcttcttcgtgggtagcattgggtggctcgctcagttcatggac
ggtgcgcgcaaagagatcgtgtgcaaaagcgacaacaccatgcggcttggagagccctca
tcgacagagacgctttcgtgtgttatcattttcatcatcgtctactactctttgatgtca
ggggtcatctggtttgttatgctcacctacgcctggcacacatctttcaaagccctgggc
actacgcaccaacctctgtctggaaagacgtcatacttccacctggtcacatggtccatc
ccgtttatcctcacagtggctatactggccattgcacaggtcgatggagactctgttagt
ggaatctgctttgttggctacaaaaactacagataccgcgctgggtttgttcttgctcca
atcggcgtggtactcactgttggtggctatttccttgtaagaggtgtcatgacactattt
tctatcaaaagtaaccatccaggactgctgagtgaaaaagcagcaagcaaaatcaacgag
accatgctgagacttggcatatttggttttcttgcatttggttttgttttcatcactttt
ggatgccatttctacgacttcttcaaccaggcggaatgggaaaggagctttagggaattt
gttctgtgtgaagctaatgtcactatagctcatcagaccaagaaaccgatcccggagtgc
accattaaaaaccggcccagtctgctggtggagaagatcaatctgttctctatgtttggt
accggcattgccatgagcacatgggtatggaccaaagccactattctcatttggaagcgc
acctggtgtaggataattggacgcagtgacgatgagccaaagcgcatcaagaagagcaag
atgattgccaaagcgttctcgaagcgaaaggaactccaaatggacccggaaaaagaattg
tccttcagcatgcacacggtgtcccatgagggaccggtggcgggtattaactttgaactg
aatgagccgtccatggaaatgtcctctgcatgggcccagcacgtgacaaagatggtggca
cgaagaggtgccattttacctcaggacatctcagttacacccactgggacacctgtgccg
cctccagaagagcgaaacaaattgtggatggtcgaagccgatatctcccctgagatgatg
aaacgtaagaagaaaaagaaaaagaggaagaaggaggtgcgttcagtagcgcctgttgaa
gagggtgtgaatccccgtcacagagagttcggtgccagcgctgtccctcgcctccccaag
ctcccggcgcatcgcagcctcgtggctaacctgtgggagcggcaacggcagcaagaggag
aacgtccttccaggttccttcccagaattccgaccttcctgtcccattccataccaggag
agatacggagggcttggctatgtttcatccaaccagcctagcagggagctgggctgtaac
ctctccaacccactgacgctaagccagtacgagggacgaggtcagttgaaacaaccggcc
tggcaatctaatggacataatggagtgttccgctattcaggtcacgagatgccttcgtca
gtgggtggtggcaggacaggctttacagcacctcgatcagagggcaggaaaccagtcaca
gcaccaatccactctagaaccaatctaatggaggcagaactcatggatgctgactctgat
ttttga

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