Ictalurus punctatus (channel catfish): 108280889
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Entry
108280889 CDS
T04658
Name
(RefSeq) transcription factor GATA-6 isoform X1
KO
K17897
GATA-binding protein 6
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108280889
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
108280889
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GATA-N
GATA
TF_Zn_Ribbon
OrfB_Zn_ribbon
Prim_Zn_Ribbon
Motif
Other DBs
NCBI-GeneID:
108280889
NCBI-ProteinID:
XP_017351872
Ensembl:
ENSIPUG00000010617
UniProt:
A0A2D0TAI3
LinkDB
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Position
20:complement(21921347..21931009)
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AA seq
474 aa
AA seq
DB search
MDLSEHSWSTVKREVSSNPGSPSEQSCVHGERRDELRTSPLDAAGSRRVDTRPLPSYAAF
GHHLSSDDVPLFADLDQAAKLGAHKAGIVVDPGDMYSTLAAYESPSAAYMHSSPNSPVYV
PTSRVGPMIPSLPYLQSSAAVSQPSHAVSSHAAWSQPAPESPSSYSTGSPHATSSRFHYS
PSPPVNNGTARDSSYPTALNASGREQYLSRPLSGSYTGPYAPYVGAQLPQLPTAWPAGPF
DNSMLHSLQSRASPLSIRPGPADFLDDAMESRECVNCGSISTPLWRRDGTGHFLCNACGL
YSKMNGLSRPLIKPQKRMSSSRRVGLSCANCQTSTTTLWRRNAEGEPVCNACGLYTKLHG
VPRPLAMKKEGIQTRKRKPKNLNKTKGSSAGSSSVPVTPTSSSSSASEENSKNSPPSAQV
NSSTMVGHIEVPGTTGSIVKYPGQEGLYTNVGLMSTSDVAASVRGDTWCPMALA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagcgagcacagctggtccacagtcaagcgtgaagtgtccagtaacccgggc
tcgccgtccgagcagagctgcgttcacggcgagcgcagggacgagttaaggacgtcgcct
ctggacgcagcggggagtcggcgcgtagacacgcggccgctgccctcctacgcagccttc
ggccaccatttgagttcggacgacgtgccgctgttcgcggacttggaccaggctgccaaa
ctcggcgcgcacaaggcagggatcgtggtggaccccggcgacatgtattcgacgttggcc
gcctacgagtcgccgtcggcagcttacatgcactccagtcccaactcgccggtgtacgtg
ccgacctcgcgggtcggcccaatgatcccgagtctgccttacctgcagtcgagcgcggcg
gtgtcgcaaccgagccacgcggtcagcagccacgctgcgtggtcacaacccgcgcccgag
agcccgtcgtcctacagcaccgggagcccacacgcgacctcaagccgctttcactactca
ccaagcccgcccgtgaacaacggcacggcaagggactcgagctacccgaccgcgctgaac
gccagcggcagggagcagtatctgtcgcggcccctgagcggctcctacaccgggccgtac
gcgccctacgtgggagctcaactgccccagttacccaccgcgtggcccgcgggacccttc
gataactccatgctgcattcattacaaagccgagcgtctccgctctccatccgacccgga
cctgcagatttcctcgacgacgcgatggagagtcgggagtgcgtgaactgcggctccatc
tccaccccgctgtggaggcgcgacggcaccggtcactttctctgcaacgcctgcggcctg
tacagcaaaatgaacggcctgagccgaccattaattaagccgcagaagcgcatgtcatct
tccagaagagtcggtctttcctgtgcaaactgccagaccagcactacgaccctgtggcgc
agaaacgcagagggggaaccggtgtgcaacgcctgtggactttacaccaaattacacggg
gtaccacgacccctggctatgaagaaggaaggtattcagacgagaaaaagaaaaccgaaa
aacttgaacaaaacaaaggggtcgtccgcaggaagcagctctgtccccgtgactccaaca
tcatcatcatcttctgcttcagaagagaactcgaagaacagtcctccatctgcgcaggtg
aattcctctactatggtgggtcatatagaagttccaggcaccacaggctccattgtgaag
taccctggccaggagggtctgtacactaacgtgggattaatgtccaccagcgacgtggcg
gcgtctgtacgtggtgacacgtggtgccccatggctctggcctga
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