Jejubacter calystegiae: FEM41_05395
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Entry
FEM41_05395 CDS
T05975
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
izh
Jejubacter calystegiae
Pathway
izh03030
DNA replication
izh03410
Base excision repair
izh03420
Nucleotide excision repair
izh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
izh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FEM41_05395 (polA)
03410 Base excision repair
FEM41_05395 (polA)
03420 Nucleotide excision repair
FEM41_05395 (polA)
03440 Homologous recombination
FEM41_05395 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
izh03032
]
FEM41_05395 (polA)
03400 DNA repair and recombination proteins [BR:
izh03400
]
FEM41_05395 (polA)
Enzymes [BR:
izh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FEM41_05395 (polA)
DNA replication proteins [BR:
izh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FEM41_05395 (polA)
DNA repair and recombination proteins [BR:
izh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FEM41_05395 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FEM41_05395 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH
Prok-E2_E
DUF2529
Motif
Other DBs
NCBI-ProteinID:
QCT19130
UniProt:
A0A4P8YF55
LinkDB
All DBs
Position
complement(1164783..1167578)
Genome browser
AA seq
931 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLLQYQPSHAAV
VFDAKGKTFRDELFENYKSHRPPMPDDLRAQIEPLHSMVKAMGLPLLVVSGVEADDVIGT
LAREAEGAGRHVLISTGDKDMAQLVTPSITLINTMTNTVLGPDEVSEKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGQKTAQALLQGLGGLDVLYGNLDKVADLSFRGAKTMGAKLEQNQ
EMARLSYQLATIKTDVPLELTCDELEVKAPEADNLLAQFEKYDFKRWTADVAAGKWLQAK
GNASAAKSKKVESVSAESQPEAQEASVLSSDDYVTILDEETLKSWIARLEKAPVFAFDTE
TDSLDGLTASLVGLSFADKPGHAAYVPVAHDYLDAPDQISRDRVLELLKPLLENEKALKV
GQNLKYDRGILDNYGISLQGIAFDTMLESYALNSVAGRHDMDSLASRWLSHKTITFEEIA
GKGKNQLTFNQIALEEAGRYAAEDADVTLRLHQTMWPQLEQEKGPLNIFRTIEMPLVPVL
SRVERNGVMIDPAVLHAHSEELGKRLVELEQQAHEIAGEPFNLSSPKQLQTILFEKQGIK
PLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHT
SYHQAVTATGRLSSTDPNLQNIPVRNDEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHL
SRDKGLLTAFAEGKDIHRATAAEVFGRPLESISSEQRRSAKAINFGLIYGMSAFGLARQL
NIPRKEAQKYMDLYFERYPGVLEYMERTRQQAKEQGYVETLEGRRLWLPEINSRNGARRA
AAERAAINAPMQGTAADIIKRAMIAVDDWLLKSEPRVKMIMQVHDELVFEVHKDDLQAVS
QKIHELMEGCMKLEVPLLVEVGSGKNWDEAH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatcgcagaaaatccacttatcctcgtcgacggatcctcctacctttatcgg
gcgtatcacgccttccccccgctgaccaacagcgcgggcgaaccgaccggagcgatgtac
ggcgtgctcaatatgctgcgcagtctgctgctacagtaccagccgtcccatgctgccgtt
gtctttgatgccaaaggcaaaacctttcgcgacgaactgtttgaaaactataaatcgcac
cgtcctcccatgccggacgatctgcgtgcgcagatcgaaccgctacacagcatggtgaag
gcgatggggctgccgcttctggtcgtgtctggcgttgaagccgatgatgttatcggcacc
ctggcgcgtgaagcagaaggcgctggccgacacgtgctgatcagtaccggcgataaggat
atggcgcagctggtcacgccatccattacgcttatcaacaccatgaccaataccgttctg
gggccggatgaggtgagtgagaagtacggcgtaccgccggaactgattatcgacttcctg
gcgctgatgggcgactcgtcagataacattcccggcgtacccggtgtgggccagaagacc
gctcaggcgctgctgcaggggctggggggactggatgtgctttatggcaacctggataag
gttgccgacctcagcttccgcggtgccaaaaccatgggtgccaaactggaacagaaccag
gagatggcgcgtctttcgtatcagctggcgaccattaagaccgatgtacccctggaactg
acctgcgatgaactggaagtgaaggcaccggaagccgacaacctgctggcccagtttgaa
aaatatgactttaagcgctggaccgccgatgttgccgccggtaagtggctccaggcgaaa
ggcaacgccagcgcggcgaagagcaagaaggttgagagtgtgagcgccgagtctcagcca
gaagcgcaggaggccagcgtactgtccagtgatgattatgtcaccatccttgatgaagag
accctgaagtcctggatcgcccgtctggagaaagcgccagtcttcgcctttgataccgaa
accgatagcctggatggtctgactgccagtcttgtgggcctttcctttgccgacaagccg
ggccatgcggcctatgtgccggttgcgcatgactatctggatgcgccggatcagatctcc
cgcgatcgggtgctggagctacttaagccgctactggaaaatgaaaaagcgctgaaagtt
ggtcagaatctgaagtatgaccgggggattcttgataactatggcatcagtctacagggt
atcgccttcgataccatgctggaatcctatgcgctgaacagcgtggccgggcgccacgat
atggacagtctggccagccgctggctgagccacaagaccatcacctttgaagagatcgcg
ggtaaggggaaaaatcagcttacctttaaccagatcgcgctggaagaagcgggccgctat
gccgcggaagatgccgacgtcacactgcgcctgcatcagaccatgtggccgcaactggaa
caggaaaaaggtccgctcaatattttccgtactattgaaatgccgctggttccggttctg
tcccgggtagagcgtaacggtgtgatgatcgatcccgccgtgctgcatgcccattccgaa
gagctgggcaagcgcctggtcgagctggagcagcaggctcatgagattgcaggcgagcca
tttaacctctcttctcccaagcagttgcagaccattctgttcgagaagcagggcattaaa
ccgctgaagaagacaccgggcggcgcgccttccacctcggaagaggtgctggaagagctg
gcgctggactatccgctaccgaaggtgatcctggaatatcgcggactggcgaagttgaaa
tcgacctataccgacaagctgccgctaatgatcaatccgaagacgggtcgggtgcatact
tcttatcaccaggcggtaaccgccaccgggcgtctgtcgtcgaccgatcccaacctgcag
aatatcccggtacgtaatgatgaggggcgccgtatccgtcaggcctttatcgccccggag
gattacgtaattgtctccgcggactattcccagattgagctgcgtattatggcgcacctg
tcccgggataaaggcctgctgaccgcctttgccgaagggaaggatatccaccgcgccacg
gcggcggaggttttcggtaggccgctggagagtatctcatctgaacagcgccgtagcgct
aaagccattaactttggtctgatttacggcatgagcgcctttggcctggcgcgccagctt
aatattccgcgtaaagaggcccagaagtatatggatctctactttgaacgctatcctggc
gtgctggaatatatggagcgcacacgtcagcaggcgaaagagcagggctacgttgaaacc
ctggaagggcgtcgcctgtggctgccggaaattaactcccgtaacggcgctcgtcgcgct
gcggcggagcgtgcggcaatcaacgcgcctatgcagggtaccgcggcggacatcattaaa
cgcgccatgatcgcggtagatgactggctactgaagtccgaaccgcgagtgaaaatgatc
atgcaggtacacgatgaactggtgttcgaagtacataaagacgatctgcaggccgtctct
cagaagatccatgagctgatggaaggctgcatgaagctggaagtgcctctgctggtggaa
gtgggtagcggtaaaaactgggatgaggcgcactaa
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