Janthinobacterium sp. B9-8: VN23_13515
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Entry
VN23_13515 CDS
T04271
Name
(GenBank) ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
jab
Janthinobacterium sp. B9-8
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jab03009
]
VN23_13515
Enzymes [BR:
jab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
VN23_13515
Ribosome biogenesis [BR:
jab03009
]
Prokaryotic type
rRNA helicases
VN23_13515
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AMC35559
UniProt:
A0A0X8GP44
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All DBs
Position
2999311..3000696
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AA seq
461 aa
AA seq
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MNTTSFANLPLSPAMLQNLDSLGYVEMTEIQAQSLPLILARRDLIAQAKTGSGKTAAFGI
GMLHKLNPSYFAIQGLVICPTRELADQVAKELRRLARFTENIKILTLCGGTPMGPQIASL
VHGAHIIVGTPGRLRDHLGRASIDLSTVQTLVLDEADRMVDMGFYDEIAGIVSACPTRRQ
TLLFSATYPDNIRKDSAKFLKLPAEVKVEAQHADSQIEQRFYSVEHEERNAAVAQLLNHY
KPVQTLAFCNTKIHCRELAAELRDQGFSALALYGELEQRERDEILVQFSNQSCSILVATD
VAARGLDIQSLGAVINVDVSKDTEVHIHRIGRTGRGHDKGLALSLAAPNEKKWVTLIEEY
QGGPVRWFDLEKLEPAEGGPLRPPMVTLCIMGGKKDKLRPGDLLGALTGDAGLTKEQVGK
INVFEFLTYVAIDRRVANKAFNSLSQGNIKGRSFKMRFLGE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgaacactacatcttttgccaatctacccctctcgccggccatgctgcaaaacttggat
agcttgggttacgtcgaaatgacggaaattcaggcgcaaagcctgccgctgattctggcg
cgccgcgatttaattgcacaggctaaaaccggcagcggcaagaccgcagctttcgggatt
ggcatgctgcataagctcaaccccagctattttgcgattcaaggtttggtgatttgccca
acgcgcgagctggcggatcaagtggcaaaagagctgcgccgtttggcccgctttactgaa
aatatcaaaattttaacgctctgcggtggcacgccgatgggcccgcaaatcgcctctctg
gtacacggggcgcatattattgtgggtacgccgggccgcttacgcgatcaccttggccgc
gcttcgattgatttatccacagtacaaacgctggtattagacgaagccgaccgcatggtt
gatatgggcttttacgacgagatcgccggtattgtgagcgcttgcccaacgcgccgccaa
accctgctgttttctgccacctatcccgacaatattcgcaaagacagcgcaaagtttctg
aagctgcctgccgaagtgaaagtagaggcgcaacatgctgacagccaaatcgaacaacgt
ttctacagtgttgagcacgaggagcgtaacgccgccgtggcgcagctactcaatcactac
aagcccgttcagacactggccttctgcaataccaagatccactgccgcgagctcgcagca
gagctccgagatcaaggttttagcgccttggcgctctacggcgagctagagcaacgcgag
cgcgacgagatccttgtgcagttttctaatcaaagctgctcgatcctggtcgccaccgat
gtggccgcgcgtggtttggatattcaaagcttgggtgcggtgattaacgttgacgtgtcc
aaagacaccgaagtgcatatccaccgcatcggccgcactggccgtggccacgataagggc
ttggcactcagcctagctgcgcccaatgaaaagaaatgggtcacactgatcgaagaatat
cagggcgggccggtacgctggtttgatctggaaaaactggagcctgcagaaggcggccct
ttgcgcccacctatggtcacgctgtgcattatgggcggcaagaaagacaagctgcgcccg
ggtgatttactcggcgcactgactggtgacgcaggcctgactaaagagcaggttggtaaa
atcaatgtgtttgaatttttaacttatgtcgccatcgacagacgcgtagctaataaagcc
tttaatagcctaagccaaggcaatatcaaaggccgcagctttaaaatgcgttttctgggc
gagtaa
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