Janthinobacterium sp. B9-8: VN23_16455
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Entry
VN23_16455 CDS
T04271
Name
(GenBank) flagellar biosynthesis sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
jab
Janthinobacterium sp. B9-8
Pathway
jab02020
Two-component system
jab02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VN23_16455
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
VN23_16455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jab03021
]
VN23_16455
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
jab02035
]
VN23_16455
Transcription machinery [BR:
jab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VN23_16455
Bacterial motility proteins [BR:
jab02035
]
Flagellar system
Flagellar assembly proteins
Stator
VN23_16455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
AMC36071
UniProt:
A0A0X8GPW4
LinkDB
All DBs
Position
complement(3657408..3658109)
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AA seq
233 aa
AA seq
DB search
MDLADAYVHSALDSKQEAAQLAAYMPLLNRVLRQLSSQVGCVLDREDMEQIGLMALLDSL
RRYGTPDDQFVGFAMLRMRGAILDELRRLDWRPRSVRQSAHRIRDEIRALRKKLGREPSE
ADTVAGLAISAKEYRDYQMAENAEVLASFDDLLSEGVHESGGAESPENGVINRLSLARAL
SGLDEKEQRVIQMYYEFELNLKEIALVLDLTEARVCQINKSAIKKMKIALGGA
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
gtggatcttgccgacgcttacgttcatagcgctttagatagcaagcaagaagccgctcag
ctggccgcctatatgccgctgctcaatcgtgtgcttaggcagctttcatcgcaggtgggc
tgtgtgctggatcgtgaagatatggagcaaattggcctgatggccctgctcgattcattg
cgccgttatggcacacctgacgatcagtttgttggctttgcaatgctgcggatgcgcggc
gctattttggatgagctcaggcgtctggattggcggccacgttcagtcaggcaaagtgcg
catcgtattcgggatgagatccgcgccttaaggaaaaaactaggcagggagccaagcgaa
gctgacacagtcgcgggcttagccatctccgccaaagaataccgtgattatcaaatggcc
gaaaatgccgaagtactggcgagttttgatgatttgctctctgagggcgtgcatgaatca
ggcggagcagaatcgccggaaaacggggtaattaatcgtcttagcttagcgcgggctttg
tctggtttggatgaaaaagagcagcgtgttatccagatgtattacgagtttgagctgaat
ttaaaagaaattgctttggtgctggatttaacagaagcacgggtttgtcagattaataaa
tcggcaattaagaaaatgaaaatcgccctgggtggggcttaa
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