Janthinobacterium sp. HH102: JAB4_026660
Help
Entry
JAB4_026660 CDS
T08624
Symbol
recB_1
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
jah
Janthinobacterium sp. HH102
Pathway
jah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JAB4_026660 (recB_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jah03400
]
JAB4_026660 (recB_1)
Enzymes [BR:
jah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
JAB4_026660 (recB_1)
DNA repair and recombination proteins [BR:
jah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JAB4_026660 (recB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QOU73211
UniProt:
A0A853T102
LinkDB
All DBs
Position
2943517..2947188
Genome browser
AA seq
1223 aa
AA seq
DB search
MTSHLLNPLAFPLHGSRLIEASAGTGKTWTIAALYVRLVLGHGDDDSRFTRPLLPADILV
MTFTRAATRELSNRVRERLIEAAAYFRHESGIESGGGDPFLDALLESCPDESERQKAAHR
LMLAAETMDEAAIFTIDAWCQRMLREHAFDSGSLFDEELVSDEQALFEDAAHDYWRQQVY
PLPPQALDVLLACWPDVAALKKGARELARRADIMGMADEEPLSALIAREQRALAAQLATL
KAGWVERVDLMAAWINEHRAANPKCFNGVKMKPENLAKWFDGLRRWAQDPLLLLPAITAK
AWERLTPFGIEDAFAKSFTAQVPECFEHTEALGIALAAITPLAHKLHLHAAAAIARRMDQ
LKRQSRQFGFADMLQRLHDALAGENGPALRQRIIDQYPLAMVDEFQDTAPAQYQIFNLLY
RIADNDPALGLFLIGDPKQSIYGFRGADIQSYLAARRATAGRHYQLGTNYRSTAPLVAAV
NQLFLHAERDEVPAGAFRYRKNGENPLPFEAVDAKGRDEYLVNAGGPLPALLAACASDEG
LRGDGYREYFAQHCAEHIVAMLGDAQAGFAGPDGFTRLQPADIAVLVRDRKEAAAIRRAL
ARRRVASVYLSDKDSVIDSEEAQDVLRWLAALANPLDGGLARAAFATRTIGLSLGELARL
SSDELEWERRVEQLKALHLIWQRQGVLAMLRRFIHELRLPAMLLQQTGGERRLTNLLHLA
ELLQSASRQLDGEQALIRWLAEQIAGEGDNGDERVLRLESDAELVKVITVHKSKGLEYPL
VYLPFAVTARKVDKRNRSFFDYADDKGERRLDLSLSDEAMAAVEEARIEEDLRLLYVALT
RARHFLWLGVAAQAARKAGENTLHESALGYLLTGGDKLPAEQLLLRWQQVAGSCDAIYVS
SLAQPDACTVLDRIERRPELRPAPVFVGEFERDWSVGSFTSLTRQIGAVAAAHVPQRALE
ETLLEDGTAVAVAAPMQMGDAPWHRFPRGSVPGNFLHEQLEWMGGEGFDGVHDANFDARL
AARCERAGWGHRQEDAIAWLREIAVTPLPLLDASLSQLDSTLSEMEFWFPSEHLSTEALD
KLCTRLLLDGAPRPALPRRQLHGMLKGFADLVIEREGRYWVLDYKSNALGANDAAYHTQA
LAAGMAQHRYDIQGAIYMLALHRLLKSRLGDAYDPAEHLGGAIFLFLRGIANADTHGCYW
LAPQLELLDGLDQLLEETEHHAA
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgacgagccacctgctcaaccccctggcgtttccgctgcacggctcgcgcctgatcgag
gcgtccgccggcaccggcaagacctggaccatcgccgcgctgtacgtgcgcctcgtgctg
ggccacggcgacgatgacagccgctttacgcgtccgctgctgccggccgatattttggta
atgacgtttacgcgcgccgccacgcgcgaattgtcgaaccgcgtgcgcgagcgcctgatc
gaggcggccgcttattttcggcacgaatctggcattgaatccggcggcggcgacccgttt
ctcgacgccctgctcgagtcctgtccggacgagagcgaacggcaaaaggccgcgcaccgg
ctgatgctggccgccgagacgatggatgaagcggccattttcaccatcgacgcctggtgc
caacgcatgctgcgcgagcacgcgttcgacagcggcagcctgttcgacgaagaactggtc
agcgacgagcaagcgctgttcgaggatgcggcccacgattactggcgccagcaagtctat
cccttgccgccgcaggcgctcgacgtgctgctggcatgctggcccgacgtggcagcgctg
aagaagggcgcgcgcgagctggcgcgccgcgccgacatcatgggcatggcggacgaagag
ccgttgtcggcgctgatcgcgcgcgaacagcgggcgctggccgcgcagctggccaccctg
aaggcgggctgggtcgagcgcgtggacctgatggccgcctggatcaacgaacaccgcgcc
gccaatcccaagtgttttaacggcgtcaagatgaagccggagaatctggcgaagtggttc
gacggcttgcgccgctgggcgcaggatccgctcctgctgctgcccgccatcacggccaag
gcgtgggaacgattgacgccgttcggcatcgaggatgcgtttgccaagagtttcacggcc
caggtgcccgagtgcttcgagcatacggaggcgctgggcatcgccctggcggccatcacg
ccgctggcgcacaagctgcacctgcatgcggcggcggccatcgcgcggcgcatggatcaa
ttaaaacgccagtcgcgccagttcggctttgccgacatgctgcagcgcctgcacgacgcg
ctggccggcgagaatggtccggccctgcgccagcgcatcatcgaccagtacccgctggcc
atggtcgatgaattccaggatacggcgcccgcgcagtaccagatcttcaatttgctgtac
cgcatcgccgacaacgatccggcgctgggcctgttcctgatcggcgacccgaaacagtcg
atctacggttttcgcggcgccgacatccaaagctacctggcggcgcggcgcgccacggca
gggcgccactaccagctgggcaccaactaccgctcgacggcgcccctggtggcggccgtc
aaccagctgttcctgcacgccgagcgcgacgaggtgccggccggcgccttccgctaccgc
aaaaacggcgagaatccgctgccgttcgaggccgtcgacgccaagggccgcgacgagtac
ctggtgaacgcgggcggccccctgccggccctgctggccgcctgcgccagcgatgaaggg
ctgcgcggcgacggctaccgcgagtatttcgcgcagcactgcgcggagcacatcgtcgcc
atgctgggcgatgcgcaagccggtttcgctggccccgacggttttacgcgcctgcagccg
gccgatatcgccgtgctcgtgcgcgaccgcaaggaagcggcggccatccgccgcgcgctg
gcgcgccgccgggtcgccagcgtctacctgtccgacaaggattccgtcatcgacagcgag
gaagcgcaagacgtgctgcgctggctggcggcgctggccaacccgctcgacgggggcctg
gcgcgcgccgcctttgccacgcgcaccatcggcctgtcgctgggcgagctggcgcgcctg
tcgagcgatgaactggagtgggagcgccgggtcgagcagctgaaggccctgcacctgatc
tggcagcggcagggcgtgctggccatgctgcgccgcttcatccacgaactgcggttgccc
gccatgctgctgcagcagacgggcggcgagcggcgcctgacgaatctgctgcacctggcc
gaactgctgcaatcggccagccgccagctcgatggcgagcaggcgctgatacgctggctg
gccgagcagatcgccggcgagggcgacaacggcgacgagcgcgtgctgcgcctggaaagc
gatgcggaactggtgaaggtcatcaccgtgcacaaatccaagggcctcgaatatccgctc
gtgtatctgccgtttgccgtcacggcgcgcaaggtcgataagcgcaaccgcagtttcttc
gattatgcggatgacaaaggcgagcgccgcctcgacctgtccttgtccgacgaagcgatg
gcggcggtcgaagaggcgcgcatcgaggaagacttgcgcctgctgtacgtggccctgacg
cgcgcgcgccacttcctgtggctgggcgtggccgcccaggcggcgcgcaaggcgggcgag
aacaccctgcacgagtcggcgctgggctacctgctgacgggcggcgacaagctgccggcg
gagcagctgctgctgcgctggcagcaggtcgcgggcagctgcgacgccatctatgtgagt
tctctggcgcagcccgacgcctgcacggtgctcgatcgcatcgagcgccgtcccgaattg
cggcccgcacccgtgttcgtgggcgaattcgagcgtgactggtcggtgggcagctttacg
tcgctgacgcgccagatcggtgccgtggcggccgcgcacgtgccgcagcgggcgctggaa
gagaccttgctggaagatggcacggccgtggccgtggccgcgccgatgcaaatgggcgac
gcgccatggcaccgcttcccgcgcggttccgtgccgggcaattttctgcatgagcagctc
gagtggatgggcggcgaaggctttgacggcgtccacgatgccaatttcgatgcgcgcctg
gccgcgcgctgcgaacgggcgggctggggccaccgccaggaagacgccatcgcctggctc
cgggaaatcgccgtcacgccgctgccgctgctcgatgcatcgctgtcgcaactggacagc
accctgtccgagatggagttctggttccccagcgagcatttgtccaccgaagcgctggat
aaactgtgcacgcgcttgctgctcgacggcgcgccgcgtcccgcgctgccgcggcgccag
ctgcacggcatgctgaaaggctttgccgacctggtcatcgaacgggaggggcgctactgg
gtgctcgactacaagtcgaatgcgctgggcgccaacgacgccgcctaccacacgcaggcg
ctggcggccggcatggcgcagcaccgctacgacatccagggcgccatctacatgctggcc
ctgcaccggctgctgaaaagccggctcggcgacgcctacgacccggccgaacatctgggc
ggcgccatcttcctgttcctgcgcggcatagcgaatgcggacacgcatggctgctactgg
ctggcgccgcagctggaattgctggacggcctcgatcaactgttagaagaaacggaacac
catgcagcatga
DBGET
integrated database retrieval system
