Jannaschia sp. CCS1: Jann_3400
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Entry
Jann_3400 CDS
T00330
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
jan
Jannaschia sp. CCS1
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jan03021
]
Jann_3400
Transcription machinery [BR:
jan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Jann_3400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
GvpK
Motif
Other DBs
NCBI-ProteinID:
ABD56317
UniProt:
Q28LU5
LinkDB
All DBs
Position
complement(3451851..3452747)
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AA seq
298 aa
AA seq
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MANYANLPAPSPEGGLNRYLQEIRKFPMLEPEEEYMLAKAWAEKEDTEAAHKMVTSHLRL
AAKIAMGYRGYGLPQAEVISEANVGLMQAVKKFDPEKGFRLATYAMWWIRAAIQEYVLRS
WSMVKLGTTSAQKKLFFNLRKAKARIGALEEGDLRPENVERIANDLGVTEAEVVSMNRRM
SGGDASLNATVGSEDEGSAQWQDWLEDEDADQATDYAERDEFQSRMALMAEAMEVLNDRE
KDILTQRRLQEKAVTLEDLSGVYNVSRERVRQIEVRAFEKLQKRMRELARQQGMLASA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggccaattatgcaaatcttcccgcaccttcgcccgagggcggcctgaaccgttacctg
caggaaatccgcaagttcccgatgctggagccggaggaggagtacatgctcgccaaggcc
tgggccgaaaaggaagacaccgaagccgcccacaagatggtgacctcgcacctgcgcctc
gccgccaagatcgccatgggctatcgcggctatggcctgccccaggccgaagtgatctcg
gaagccaatgtaggcctcatgcaggccgtcaagaagtttgatcccgaaaagggcttccgc
ctggcgacctatgcgatgtggtggatccgggccgcgatccaggaatatgtcctgcgctcg
tggtcgatggtgaagctcggcacgacgtctgcgcaaaagaagctcttcttcaacctgcgc
aaggccaaggcccgcatcggcgcgttggaggaaggcgacctgcgccccgaaaacgtcgaa
cggattgccaatgatctgggcgtgacggaggcggaagtcgtctccatgaaccggcgcatg
tcgggcggtgacgcgtccctgaacgccacggtcggctccgaggatgaaggctctgcccaa
tggcaggactggctggaagatgaagatgccgatcaggcgacagattacgccgagcgggac
gaattccaaagccggatggccctgatggccgaggcgatggaagtgctcaatgaccgggag
aaggacattctgacccagcgccgcctgcaggagaaggccgtcacgttggaagacctctcg
ggcgtctataatgtcagccgcgagcgggtccgccagatcgaggtgcgcgcgttcgagaag
ctgcaaaagcggatgcgggaattggcgcgccagcaaggtatgctcgcttccgcctaa
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