Jeotgalibacillus malaysiensis: JMA_42800
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Entry
JMA_42800 CDS
T03570
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
jeo
Jeotgalibacillus malaysiensis
Pathway
jeo03030
DNA replication
jeo03430
Mismatch repair
jeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JMA_42800
03430 Mismatch repair
JMA_42800
03440 Homologous recombination
JMA_42800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jeo03032
]
JMA_42800
03400 DNA repair and recombination proteins [BR:
jeo03400
]
JMA_42800
Enzymes [BR:
jeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JMA_42800
DNA replication proteins [BR:
jeo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JMA_42800
DNA repair and recombination proteins [BR:
jeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JMA_42800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
Motif
Other DBs
NCBI-ProteinID:
AJD93597
UniProt:
A0A0B5AY25
LinkDB
All DBs
Position
unnamed:474339..476921
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AA seq
860 aa
AA seq
DB search
MILHFTHPELTEKERVLLTLNKEGNVDVRKRKEGGKEEVLEDWSVIDTLPGQGFHENGRH
LFKNRKQFFAIAENGLLNIVRYVNLHGHSEYSILDCISRISDIVKKAEWAIAVTDHGNMF
GSLEFYKAMKKAGKKPIIGFEAYHYSRDMEEKSHHIVLLAKNAKGVKNLFKMTSNGYHNF
NSKPQITWEDMKKHSEGVVCLSACIAGEIPQAIIRGDMDKARDLIQGMIDIFGKENYYLE
IQRHGLAEEKVVEEGVFQLADEFGLKVVATTDSHMTNIDDKDVHDIHLCIGTKRTLDDPN
RWSFDGDGYHIHTSAEMVKRFDDVPDVLDNTLDLAEMLHPELDTGNVYMPHFPLPEGFKD
ENDYLKHLVMKGFEKRFEGKPAFTSPEYHERIEFELETVKKMGFPGYFLIVEDFVSYAKN
RGIPVGPGRGSACGSLLTYCLGITNVDPIPFGLLFERFLNPDRISMPDIDIDFSDTRREE
VINYVREKYGHEAVSGVITFGRMKAKSVVRDVARVMGFPTAFGDRIAKLVPNKLEENGNN
VKVTLPNVLRLSTEFKRLYKAEPDVKKVVDFGIRLEGLPRTLSQHACAILISPSAVSDYI
PLVTLKNRQTGGRDTVTQFTMGECEEMGILKMDFLGLRTMGVFERALNYINAMKKTGEKP
LFLDDISIGDHNVYDFISKGNTAGVFQLESPGMTGLMGQLYQDIHKMKGTKEEGIQLFER
LVAGVSLYRPGPMDEIPNYVKNMLTPHGIHYDIPELEDILKPTYNVIVYQEQVMHIVRQL
AGFSKGDADGVRKSMGKKLEDLLNMYGEYFLYGNKEKAISGAIANGVDEEMAKELWERMK
KFGLYASIGALGLKDSRKIG
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
ttgattttacactttacacatccggagcttacagagaaggaacgggttttgctcaccctt
aacaaagaaggaaacgtcgatgtacgcaaacggaaagaaggtggaaaagaggaagttttg
gaagactggtcggtcattgatacattgccaggacaaggcttccatgaaaatggacgacat
ctctttaaaaatcgaaagcaattctttgcgattgcggaaaatggattattgaacattgtg
cgatatgtcaacttacatgggcatagtgaatattcgattctcgactgtattagccgaatc
tcagatatcgtaaaaaaagcagagtgggcaatcgctgttactgaccacggaaatatgttc
ggttcgcttgagttctataaagcgatgaagaaagccgggaaaaagccgattatcgggttt
gaagcgtaccactattcacgagacatggaagaaaagtctcaccacattgttctcctcgct
aaaaatgccaaaggtgttaaaaacctctttaaaatgacctcaaacggctaccacaacttc
aactcgaaacctcaaatcacatgggaagatatgaagaagcacagtgaaggggttgtctgc
ctgtccgcatgtatcgcaggtgaaattcctcaagccatcattcgtggcgacatggataaa
gcacgtgacttgattcaagggatgattgacattttcggaaaagaaaactactaccttgag
attcaacgtcatggtcttgcggaagaaaaagtggtggaagaaggcgtgtttcaactagct
gatgagtttggtcttaaagtggtcgctacaaccgatagtcacatgacaaacattgatgat
aaagatgtacacgacattcatctctgcattggtacgaagcggacacttgatgacccgaat
cgttggtcattcgatggagatggttatcatatccacacatccgctgaaatggtcaagcga
tttgacgatgtgccagatgtattagacaacacgttggatttagcagagatgcttcatcca
gaacttgatacagggaatgtctacatgccacacttcccgcttccagaaggatttaaagat
gaaaacgactatctaaaacaccttgtcatgaagggattcgaaaaacgtttcgaaggaaaa
ccggcatttacgagtcctgaataccatgagcggattgagtttgagttggagacggttaaa
aagatgggcttcccaggatacttcttgattgttgaagactttgtctcctatgcaaaaaat
cggggaatcccagtaggtccgggtcgtggttcagcttgtggttcgttgcttacgtactgc
ttaggtatcacaaacgtagacccaattcctttcggtctcctcttcgagcgattcttgaac
cctgaccgtatctcgatgccagatattgatatcgatttctctgatacacgtcgtgaagaa
gttatcaactatgttcgtgaaaaatacggacatgaagcggtatcaggtgttatcacattc
ggtcgtatgaaagcgaaaagtgtggtgcgagatgtagcacgagtgatgggcttcccaaca
gcgtttggtgaccgtattgcaaaattggttccaaataagcttgaagaaaacgggaacaac
gttaaagttaccttaccaaacgtattgcgtctttcaacagagtttaagcgactatataaa
gcagagccggacgtgaagaaagtagtcgatttcggaattcgtcttgaaggcttaccacgg
acactttctcagcacgcttgtgcaattctgatttcacctagtgctgtttcagattacatt
ccgcttgttaccttaaagaaccgccaaacaggtggacgtgacacggtaacgcaattcacg
atgggtgaatgtgaagaaatgggtatcttgaaaatggacttcttgggtcttcggacgatg
ggtgtgttcgaacgtgccttgaactacatcaatgcgatgaagaaaacgggcgaaaaacca
ctgttccttgatgacatctcaatcggagaccataacgtctacgactttatctcgaaaggg
aacactgccggagtattccaattggagtcaccaggtatgaccggtttgatgggtcagctc
taccaggatattcacaagatgaagggtacgaaggaagaagggattcagctctttgagcgt
ttagtagcgggtgtgtcattgtaccgcccgggaccgatggatgaaatcccgaactacgtc
aagaacatgttgacgccacacgggattcattatgacattccggaacttgaagacatctta
aaaccgacgtacaacgtaatcgtgtatcaggagcaggttatgcacatcgtccgtcaatta
gccggattctcgaaaggggatgctgatggtgtccgcaaatcaatgggcaagaagcttgaa
gacctcctgaatatgtatggagaatacttcctctatggaaataaagaaaaggctatttca
ggagctattgctaacggagtagatgaagaaatggcgaaagagttatgggaacgaatgaag
aagttcggtctatacgcatcaataggtgcccttgggttgaaagattcaaggaaaatcggg
tga
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