Janibacter limosus: EXU32_04425
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Entry
EXU32_04425 CDS
T05853
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
jli
Janibacter limosus
Pathway
jli03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
jli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EXU32_04425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jli03400
]
EXU32_04425
Enzymes [BR:
jli01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EXU32_04425
DNA repair and recombination proteins [BR:
jli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EXU32_04425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Anti-TRAP
DUF2786
Motif
Other DBs
NCBI-ProteinID:
QBF45576
UniProt:
A0A4P6MRY5
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All DBs
Position
complement(909829..910692)
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AA seq
287 aa
AA seq
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MPEGDTVWRTAQRLHAALAGRPATLVDIRWGEVDEAPLRGAVVDEVVPRGKHLLHRLDSG
WTLHTHLRMEGSWRVEAAGSDAAARALRRPDLRAAIGNDDWTTLGLRLGELDVVRRTDEH
LLVGHLGPDVLGADWDPADAARRILGSSAGTSIAAALLDQRVLAGVGTFWASEALFVQRL
HPWREASALSPEEADALVARVHELMLRGREHAIQSSTGILRNDARSWVHARSGRPCRRCG
ETVRVAPLGRLGPDRVFFSCPQCQGGLAPTDDGRPQAPLGARRRARP
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagggagacaccgtctggcgcaccgcgcagcggctccacgccgccctggccggg
cggccggcgacgctcgtggacatccggtggggcgaggtcgacgaggcgcccctgcgcggc
gccgtcgtcgacgaggtggtgccgcgcggcaagcacctgctccaccgactcgactcggga
tggaccctccacacgcacctgcgcatggaggggtcgtggcgggtcgaggccgccgggtcg
gacgcagccgcccgcgccctgcgacgacccgacctgcgcgctgcgatcggcaacgacgac
tggaccaccctcgggctgcgactgggcgagctcgacgtcgtgcgccgcaccgacgagcac
ctgctcgtcggtcacctcggcccggacgtgctgggcgccgactgggacccggccgacgcg
gcccgacgcatcctcgggtcgagcgccggcacctcgattgccgcggcactcctcgaccag
cgggtcctggccggggtcgggacgttctgggcgagcgaggcgctcttcgtgcagcgactg
cacccctggcgcgaggcgagcgccctgtcaccggaggaggccgatgccctcgtcgcgcgg
gtccacgagctcatgctgcgcggtcgggagcatgcgatccagtcctcgaccggcatcctg
cgcaacgatgcgcgctcgtgggtccacgctcgctccggtcgtccctgccggcgctgcggc
gagaccgtgcgagtggctccgctgggccggctgggtccggaccgggtcttcttctcctgc
ccgcagtgccagggcggtctcgcccccacggacgacggacggccacaggccccgctgggt
gcacgtcgacgcgcacgaccttaa
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