Janthinobacterium rivuli: P9875_13275
Help
Entry
P9875_13275 CDS
T09016
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
jri
Janthinobacterium rivuli
Pathway
jri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
P9875_13275 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jri03400
]
P9875_13275 (recD)
Enzymes [BR:
jri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
P9875_13275 (recD)
DNA repair and recombination proteins [BR:
jri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
P9875_13275 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
SH3_13
RecD_N
Helicase_RecD
AAA_11
AAA_22
UvrD-helicase
DEAD
PhoH
AAA_25
SLFN-g3_helicase
nSTAND3
Tuberculin
AAA_28
MazG_C
Mg_chelatase
DUF1654
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WFR82069
LinkDB
All DBs
Position
2890414..2892372
Genome browser
AA seq
652 aa
AA seq
DB search
MNHDVALDALFTHVDGVAEAGHLRRLSAAFARFIASLDEQAPNASAVAVACVVLSELEGR
GHSCLMLADLSGEPSQLLGWSEELWHGVLAVSGPLPDSVDGWRALLAGAPQVWQVGAPDV
KQPLVLDGDRLYLRRYWRDESLVGEKIAARAQDLTNPPLAQVRQWLDILFDQPTHDGGPD
WQKVACAVALRGKVAIITGGPGTGKTYTVASLLTLLFAVSPQPEQLRIALAAPTGKAAAR
LKQSIDKALSGLAKKVGVALPLLELARRMGAARTLHSLLGARPDTRAFAHHAGNPLDVDV
LIVDEASMVHLEMMASVLDALPSTAILILLGDKDQLASVEAGAVLGDLCHDAQAGGYTDA
TIAYAQAASGVAIPADFAGAAGALAQQTVMLRHSHRFSGPIGELALAVNGGRPDLARACF
ASDSGGQLAWTVPAQQEDVLRLALRGRLEAPGGYQPYLQLVNAGEAAYAQHDDWVRAVLH
AFEAFRILCAVREGEWGVAGLNTAIELRLEKEGLIRRSEWYVGRPVMVTRNDYGTGVFNG
DIGLTLRDPARPGSLRVYFLEGENVRSVLATRLRHVETAFAMTVHKSQGSEFRHTVLVLP
QEGGAMLARELVYTGITRARDFFTLVSPTQAVLFDAILRRTQRASGLRGLIG
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatgacgtggccctggacgccctgtttacccatgtagacggcgtcgccgaagcg
ggccatctgcgccgcctgagcgccgcctttgcccgcttcatcgccagcctggacgagcag
gcgccaaatgcgtccgccgtggccgtggcgtgcgtcgtgctatccgagctggaagggcgg
ggccatagctgtttgatgctcgctgacctgtctggcgaaccgtcgcagttgctgggctgg
agcgaggagctgtggcatggcgtgctggccgtttccggcccgctgccggacagcgtcgat
ggctggcgcgcgctgctggccggcgcgccgcaggtgtggcaggtgggtgcgcccgacgtg
aaacagccgctggtgctcgatggcgaccgcctgtatttgcgccgctactggcgcgatgaa
agcctggtgggcgaaaaaatcgccgcgcgcgcacaggatttgaccaatccaccgctggcg
caggtgcggcaatggctcgacatcctgttcgaccagccgacgcacgacggtggtccggac
tggcaaaaagtggcgtgcgccgtcgccctgcgcggcaaggtggccatcatcacgggcggg
ccggggacgggcaagacgtacacggtggccagtttgctgaccttgctgtttgccgtctcg
ccgcagccggagcagctgcgcatcgcgctggccgcgcccacgggcaaggcggccgcgcgc
ttaaaacagtcgatcgacaaggccttgagcggcctggcgaaaaaggtcggggtagccttg
cccctgctggaactggcgcggcgcatgggcgcggcccgcaccctgcatagcttgctgggc
gcgcggcccgatacgcgcgcctttgctcaccacgcgggcaatccgctcgacgtcgacgtg
ctgatcgtcgatgaagcgtcgatggtgcacctggagatgatggcgtccgtgcttgacgcc
ttgccgtccacggcgatattgatcctgctcggcgacaaggaccaactggcgtccgtggaa
gcgggcgccgtgctcggtgacttgtgccacgacgcgcaggcgggcggctatacggacgcc
accatcgcgtatgcgcaggcggccagcggcgtggccattccggccgactttgcgggggcg
gccggcgcgctggcgcagcagacggtgatgctgcgtcacagccaccgtttcagcggcccg
atcggcgagctggccttggccgtgaacggcggcaggcccgatctggccagggcgtgcttc
gccagcgacagcggcggccagctggcgtggacggtgccagcgcagcaggaagacgtgctg
cgcctggccttgcgcggacggcttgaggcgccgggcgggtatcagccgtatctgcaactg
gtgaatgccggcgaggccgcgtacgcgcagcatgacgactgggtgcgcgccgtgctgcac
gcgtttgaagcattccgcatcctgtgcgccgtgcgcgagggagaatggggcgtggccggc
ctgaacacggccatcgagctgcggctggaaaaggaaggcttgatacgccgcagcgaatgg
tatgtgggccgtcccgtgatggtcacgcgcaacgactatggcacgggcgtgttcaatggc
gacatcggcctgactttgcgcgatccggcgcggccgggatcattgcgcgtgtacttcctg
gaaggcgagaacgtgcgcagtgtgctggccacgcgtttgcgccatgtggaaacggcgttc
gccatgacggtgcacaaatcgcagggctcggaatttcgccacacggtgctggtgctgccg
caggagggcggcgccatgctggcgcgcgaactggtctacacgggcatcacgcgcgcgcgc
gacttctttaccctcgtctcgcccacgcaggccgtgctgttcgacgcgattctgcgccgc
acgcagcgcgccagcgggctgcgcggcttgatcggctga
DBGET
integrated database retrieval system
