Janthinobacterium svalbardensis: CNX70_12910
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Entry
CNX70_12910 CDS
T05119
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
jsv
Janthinobacterium svalbardensis
Pathway
jsv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CNX70_12910 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jsv03400
]
CNX70_12910 (recB)
Enzymes [BR:
jsv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CNX70_12910 (recB)
DNA repair and recombination proteins [BR:
jsv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CNX70_12910 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ATD60961
UniProt:
A0A290WVR9
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All DBs
Position
2876346..2880020
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AA seq
1224 aa
AA seq
DB search
MTSHLLNPLAFPLHGSRLIEASAGTGKTWTIAALYVRLVLGHGDDDSRFTRPLLPADILV
MTFTRAATRELSNRVRERLIEAAAYFRHESGIESGGRDPFLDALLVSYPDESERQKAAHR
LMLAAETMDEAAIFTIDAWCQRMLREHAFDSGSLFDEELVSDEQALFEDAAHDYWRQQVY
PLAPQALDVLLACWPDVGALKKGARELARRADIMGMAHEEPLSALIAREQRALAAQLASL
KAGWVERTDQMATWINDHRAANPKCFNGVKMKPENLAKWFDGLRRWAQDPLLLLPAITAK
AWERLTPFGIEDAFAKSFAAPVPECFEHTEALGIALAGITPLGHKLHLHAAAAIARRMDQ
LKRQSRQFGFADMLQRLHDALAGENGAALRQRIVDQYPLAMVDEFQDTAPAQYQIFNLLY
RIADNDPAQGLFLIGDPKQSIYGFRGADIQSYLAARRATAGRHYQLGTNYRSTAPLVAAV
NQLFLHAERAEVPAGAFRYRKGGENPLPFDAVDAKGRDEWLVNAGGPLPALLAACASDEG
LRGDSYREYFAQHCAEHIVAMLGDAQAGFAGPDGFTRLEPADIAILVRDRKEAAAIRRAL
ARRRVASVYLSDKDSVVDSEEAQDVLRWLAALANPLDGGLARAAFATRTIGLSLGELARL
SSDELEWERRVEQLKALHLIWQRQGVLAMLRRFIHELQLPAMLLQQTGGERRLTNLLHLA
ELLQSASRQLDGEQALIRWLAEQIAGEGEGGDERVLRLESDAELVKVITVHKSKGLEYPL
VYLPFAVTARKVDKRNRSFFDYAGGNGERRLDLSLSDEAMAAVEEARIEEDLRLLYVALT
RARHFLWLGVAAQAARKAGENTLHESALGYLLTGGDKLPAEQLLLRWQQVAGDCEAIYVS
SLAQPDACTVLDRIERRPELRPAPVFTGEFERDWSVGSFTSLTRQIGAVAAAHVPQRALE
ETLLEDGSGVPAASPLQTGDAPWHRFPRGSVPGNFLHEQLEWMGGEGFDSVHEAHFDTRL
AARCERAGWGHRQDDAIAWLREIAITPLPLLDASLSQLDSTLSEMEFWFPSEHLSTAALD
QLCTRLLLGGAPRPALPRRQLHGMLKGFADLVIERDGRYWVLDYKSNALGASDAAYHTQA
LAAGMAQHRYDIQGAIYMLALHRLLKSRLGDAYDPAEHLGGAIFLFLRGIANADTHGCYW
LAPQLELLDGLDQLLSEEAEHHAA
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgacgagccatctgctcaaccccctggcgttcccgctgcacggctcgcgcctgatcgaa
gcctcggccggcacgggtaaaacctggaccattgccgcgctgtacgtgcgtctcgtgctg
gggcacggcgacgacgacagccgctttacgcgcccgctgctgccggccgacatcctcgtg
atgacgtttacccgcgccgccacgcgcgaattgtcgaaccgcgtgcgcgagcgcctgatc
gaggcggccgcctatttccgccacgagtccggcattgaatccggcggccgcgatccgttt
ctcgacgccttgctggtatcctatccggacgaaagcgagcggcaaaaggccgcgcaccgg
ctgatgctggccgccgagacgatggatgaagcggcgattttcaccatcgacgcctggtgc
cagcgcatgctgcgcgagcacgcgttcgacagcggcagcctgttcgatgaagaactggtt
agcgacgagcaagccctgttcgaggatgcggcccacgattactggcgccagcaagtctat
cccctggcgccgcaggcgctcgacgtgctgctggcctgctggcccgacgtgggggcgctg
aagaaaggcgcgcgcgagctggcgcgccgtgcggacatcatgggcatggcgcacgaggaa
ccgttgtccgcgctgatcgcgcgcgaacagcgggcgctggccgcgcagctggccagcctg
aaggcgggctgggtcgaacgcacggaccagatggctacctggatcaacgaccaccgcgcc
gccaatcccaagtgttttaacggcgtcaagatgaagccggagaacctggcgaagtggttc
gacggcttgcgccgctgggcgcaggacccgctgttgctgctgcccgccatcacggccaag
gcgtgggaacgtttgacgccgttcggcatcgaggatgcgtttgccaagagtttcgcggcc
ccggtgcccgagtgcttcgagcataccgaggcgctggggatcgccctggcgggaattacg
ccgctggggcacaagctgcacctgcatgcggcggcggccatcgcgcggcgcatggatcag
ttaaaacgccagtcgcgccagttcggctttgccgacatgctgcagcgcctgcacgacgcg
ctggcgggcgagaatggcgcggccctgcgccagcgcatcgtcgatcaatacccgctggcg
atggtcgacgaattccaggatacggcgccggcccagtaccagatcttcaatctgctgtac
cgcatcgccgacaacgacccggcgcaaggcctgtttctgatcggcgacccgaagcagtcg
atctacggctttcgcggcgcggacatccagagctacctggcggcgcggcgcgccacggca
ggacgccactaccagctgggcaccaactaccgctcgacggcgccgctggtggcggccgtc
aaccagctgttcctgcatgccgagcgcgccgaagtgccggctggcgcctttcgctaccgt
aaagggggcgagaatccgctgccgttcgatgcggtcgacgccaagggccgcgatgaatgg
ctggtgaacgcaggcggtccgctgccggcactgctggccgcctgcgccagcgatgaaggg
ctgcgcggcgacagctaccgcgagtactttgcgcagcattgcgccgagcatatcgtcgcc
atgctgggcgatgcgcaagccggttttgccggccccgacggtttcacgcgcctggagccg
gccgatatcgccatcctcgtgcgcgaccgcaaggaagcggcggccatccgccgtgcgctg
gcgcgccgccgggtcgccagcgtctacctgtccgacaaggattccgtcgtcgacagcgag
gaggcgcaagacgtgctgcgctggctggcggctttggccaacccgcttgacggggggctg
gcgcgcgccgcgtttgccacgcgcaccatcggcctgtcgctgggcgagctggcgcgtctg
tccagcgatgaactggaatgggagcgccgcgtcgagcaactcaaggccctgcatttgatc
tggcagcgccagggcgtgctggccatgctgcgccgcttcatccacgaattgcagctgccg
gccatgctgctgcagcagacgggcggcgagcggcgcttgacgaatctgctgcacctggcc
gaactgctgcaatcggccagccgccagctcgatggcgagcaagcgctgatacgctggctg
gccgagcagattgccggtgaaggcgagggcggcgacgagcgcgtgctgcgcctggaaagc
gatgcggaactggtgaaggtcatcaccgtgcacaaatccaagggactcgaatatccgctc
gtgtatctgccgttcgccgtcacggcgcgcaaggtggataaacgcaaccgcagcttcttc
gactatgcggggggcaatggcgaacgccgcctcgacctgtcgctgtccgacgaggccatg
gccgcggtcgaagaggcgcgcatcgaggaagacttgcgcctgctgtacgtggcactgacg
cgcgcgcgccactttttgtggctgggcgtggccgcccaggcggcgcgcaaggcgggcgag
aataccctgcacgaatcggcgctcggctatctgctgacgggcggcgacaagctgccggcg
gagcagttgctgctgcgctggcagcaggtggcgggcgattgcgaggccatttacgtgagc
tctttggcgcagcccgatgcctgcacggtgctggaccgcatcgagcggcgcccggagttg
cgtccggcccccgtttttactggagagttcgagcgcgactggtcggtgggtagttttacc
tcgctgacgcggcagatcggtgccgtggcggccgcgcacgtgccgcagcgggcgctggaa
gagaccttgctggaagacggcagcggcgtgccagccgcgtcgccgctgcagacgggcgac
gcgccgtggcaccgtttcccgcgcggctccgtgcccggcaatttcctgcacgagcagctc
gagtggatgggcggcgaaggttttgacagcgtccacgaagcgcactttgacacgcgcctg
gcggcgcgctgcgagcgtgcgggctggggccaccgccaggacgacgccatcgcctggctc
agggaaatcgccatcacgccgctgccgctgctcgatgcctcgctgtcgcagttggacagc
acgctatccgagatggagttctggttccccagcgagcatttgtccaccgcagcgctcgac
cagttgtgcacgcgcttgctgttgggcggcgcgccgcgtcccgcgctgccgcggcgccag
ctgcacggcatgctgaaaggctttgccgacctggtcatcgaacgcgatggccgctattgg
gtgctcgactacaagtcgaatgcgctgggcgccagcgacgccgcctaccatacgcaggcg
ctggcggccggcatggcgcagcaccgctacgatatccagggtgccatctacatgctggcc
ctgcaccggctgctgaaaagccggcttggcgacgcgtacgatccggccgagcacctgggc
ggcgccatcttcctgttcctgcgcggcatagcgaatgcagatacgcacggctgctactgg
ctggcgccgcaactggaactgctcgatggacttgatcaactgttatctgaggaagcggaa
catcatgcagcatag
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