Janthinobacterium svalbardensis: CNX70_17780
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Entry
CNX70_17780 CDS
T05119
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
jsv
Janthinobacterium svalbardensis
Pathway
jsv03410
Base excision repair
jsv03430
Mismatch repair
jsv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CNX70_17780 (recJ)
03430 Mismatch repair
CNX70_17780 (recJ)
03440 Homologous recombination
CNX70_17780 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jsv03400
]
CNX70_17780 (recJ)
DNA repair and recombination proteins [BR:
jsv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CNX70_17780 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CNX70_17780 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CNX70_17780 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
ATD61804
UniProt:
A0A290WY51
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All DBs
Position
4012106..4013806
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AA seq
566 aa
AA seq
DB search
MTRTRIATRPCPYRESELLRQGGIHPVLARLYASRGLTDAAELSSELAALMPPSGLLHIG
AAGAFLADAIAAKKRMVIVADYDCDGATACAVAIRGLRAMGADVDFIVPNRFEYGYGLTP
EIVELTAREKSPDIIITVDNGIASIDGVAEANRRGIQVVVTDHHLPADTLPDAAVIVNPN
QPACGFPSKNLAGVGVVFYVLLALRAELRRRGVFDAQTQPKLDNLLDLVALGTVADVVRL
DSNNRILVAQGLKRMRKGNMHAGVAALFRVAGREARSATPFDLGFALGPRLNAAGRLQDM
SLGIECLVTDDEGRAWALAQQLNDINLKRREIEAEMQDTALLHLDDFEPANSSTISVFDA
SWHQGVIGIVASRLKEKFYRPTITFAPGADGWIKGSGRSIPGFHLRDALDLVSKRAPSLI
DKFGGHAMAAGLTIRADAFEAFSQAFEAVGQAWLSQQQLERVVETDGPLEDAYYTTAFIE
LMDGQVWGQGFAPPVFCDEFRVVSQRILKERHLKLLLEKNGVRFDAIWFGHTEALGERTR
VAFRLDANEYNGTTKVQLMVEHAEPV
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtacccgcatcgccacccgtccctgcccctaccgcgaatccgaattgctgcgc
caaggcggcatccaccccgtgctggcccgcctgtacgcttcgcgcggcctgacggacgcg
gcagaactgtcgagcgaactggcggccctgatgccgccgtccggcttgctgcacatcggc
gcggccggcgccttcctggccgacgcgattgctgccaagaaacgcatggtcatcgtggcc
gactacgattgcgacggcgccaccgcctgcgccgtggccattcgcggcttgcgcgccatg
ggcgccgacgtcgatttcatcgtgcccaaccgttttgaatacggctacggcctgacgccg
gaaatcgtcgaactgacggcccgcgaaaagtcgcccgacatcatcatcaccgtcgacaac
ggcatcgccagcatcgacggcgtggccgaggcgaaccggcgcggcatccaggtggtcgtc
accgaccaccatttgccggccgacaccctgcccgacgcggccgtcatcgtcaacccgaac
cagcccgcctgcggctttcccagcaagaacctggccggcgtgggcgtggtgttctacgtg
ctgctggccctgcgggccgaactgcgccggcgcggtgtgttcgatgcgcagacgcagccc
aagctcgacaacctgctcgatctggtggcgctgggcacggtggccgacgtggtgcgcctc
gatagcaacaaccgcatcctcgtcgcgcaaggtctcaaacgcatgcgcaaaggcaatatg
cacgctggtgtggcggccctgttccgcgtggcgggccgcgaagcgcgcagcgccacgccg
ttcgacctgggctttgccctgggcccgcgcctgaatgcggccgggcgcctgcaagacatg
tccttgggcatcgaatgcctggtcacggacgacgaaggccgcgcctgggcgctggcacag
caactcaacgacatcaacctgaagcgccgcgaaatcgaggcggaaatgcaggatacggcc
ctgctgcacctcgatgatttcgaaccggccaacagcagcaccatcagcgtcttcgatgca
tcctggcaccagggcgtgatcggcatcgtcgcctcgcgcctgaaggaaaagttttatcgc
ccgaccatcacgtttgcgcccggcgccgacggctggatcaagggctcgggccgctcgatt
cccggctttcacttgcgcgacgcgctcgacctggtgtcgaaacgggcacccagcctgatc
gacaagttcggcggccacgccatggcggcggggctgaccatccgcgccgacgccttcgag
gcgttttcccaggccttcgaagccgtgggccaggcctggctcagccagcagcagctggaa
cgggtcgtggaaacggacggcccgctggaagacgcgtattacacgacggccttcatcgag
ctgatggatgggcaagtgtggggccagggcttcgccccgcccgtcttttgcgatgaattc
cgcgtcgtcagccagcgcatcttaaaagagcgccatttgaaactgctgctggaaaagaac
ggcgtgcgcttcgacgccatctggttcggccacaccgaggcgctgggcgaacgcacgcgg
gtcgccttccggctcgatgcgaatgaatacaatggcacgaccaaagttcaactcatggta
gagcacgccgaacctgtgtag
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