Kutzneria albida: KALB_1606
Help
Entry
KALB_1606 CDS
T03039
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
kal
Kutzneria albida
Pathway
kal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KALB_1606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kal03019
]
KALB_1606
03009 Ribosome biogenesis [BR:
kal03009
]
KALB_1606
Enzymes [BR:
kal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
KALB_1606
Messenger RNA biogenesis [BR:
kal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KALB_1606
Ribosome biogenesis [BR:
kal03009
]
Prokaryotic type
rRNA processing factors
KALB_1606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AHH94978
UniProt:
W5W1B8
LinkDB
All DBs
Position
1767038..1769776
Genome browser
AA seq
912 aa
AA seq
DB search
MPNKRRPAGTTGGVKTTAIPSVDTTAQDHHPLLGAELPEKLRVHALAKLLGAASKDVLAV
LTDLGEAVRSPQSSVARDIAVRVAYTLSPVEQEAPAAEEAVEEEPEAPEDTPVDAEDETA
VALAPVFAPPSVVFLPPAEAAPAKSRRKPEPVVVAEQPAEPEQAEQEEDHEDLDGEDENG
TRRRRRRGRRGRGRGKGGAESDSDHDEEQGEPEAPAEQAEAPEQDASAEEEAEADGGSRR
RRRRRRRKGGEDSEAASTSDDPPNTVVHVRNSPAREEQDKDRADSAAAQSEVRSVRGSTR
LEAKRQRRRDGREAGRRRVPILSEAEFLARREAVERKMVVRERGDRTQIAVLEDGVLVEH
FVTSAGTGSLVGNVYLGRVQNVLPSMEAAFVDIGRGRNAVLYAGEVDWDAAGLEGKARKI
EQALSTGDSVLVQVTKDPVGHKGARLTTQISLPGRFLVYVPGGGATGISRKLPDNERKRL
KDILKRVVPEDAGVIIRTASEGIAEEELGRDVQRLQAQWEVIKQKADTPKAQAPQLLYEE
PDLLVKVVRDLFTEDFSALIVQGEDAWDTIDAYVRHVAPDLAERLRKHVGTNDVFTEQRI
DEQITKALDRKVWLPSGGYLVIDRTEAMTVIDVNTGKFTGSGGNLEETVTRNNLESAEEI
VRQLRLRDIGGIIVIDFIDMVLESNRDLVLRRLTECLGRDRTRHQVAEVTSLGLVQMTRK
RVGTGLLEAFSSTCEHCRGRGVVVTAEPVHSHGGGGNNGNGNNNGNGHANGGGQSGGGRK
RNRNRHADKHEDAKHHEDVKHEDAKPEQAQPEQAQQEQAPAEQPAVRPEPVTSPEPVTST
PVAALEVGKAEVSVPYEVPEQPTLEQANGHHVAVAEPERAPEAAAKPATARRRSRRAASR
PAGPPVSAASQD
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgccgaacaagcgacgccccgccggtacgaccggcggggtgaagaccacagccatcccc
agtgtcgacaccaccgcacaggaccaccaccccctgctcggtgccgagctcccggagaag
ctccgggtgcacgcactggccaagctgctcggtgcggccagcaaggacgtgctcgcggtg
ctcaccgacctcggtgaggccgtgcgcagcccgcagtccagcgtggccagggacatcgcc
gtgcgcgtcgcgtacacgctgagcccggtcgagcaggaggcgcccgccgccgaggaggcg
gtcgaggaggagcccgaggcccccgaggacaccccggtggacgccgaggacgagaccgcc
gtggcgctggccccggtgttcgcgccgccctcggtggtcttcctgccgcccgccgaggcc
gcgcccgccaagagcaggcgcaagccggagccggtcgtcgtggccgagcagcccgccgag
ccggagcaggccgagcaggaggaggaccacgaggacctggacggcgaggacgagaacggc
acccgccgtcgtcgtcgccggggtcgccgtggccgtggccggggcaagggcggcgccgag
agcgactcggaccacgacgaggagcagggcgagccggaggcccccgccgagcaggccgag
gcgcccgagcaggacgcgtccgccgaggaggaggccgaggcggacgggggcagccgtcgc
cgtcgtcgccgtcgccgccgcaagggcggggaggacagcgaggccgcgagcacctcggac
gacccgccgaacaccgtcgtgcacgtgcgcaactcgcccgcccgcgaggagcaggacaag
gaccgggccgactcggccgccgcgcagagcgaggtgcgcagcgtccgcggctccacccgg
ctggaggccaagcgccagcgccgcagggacggccgcgaggcgggccgccgccgcgtgccg
atcctgtccgaggccgagttcctggcccgccgcgaggccgtcgagcgcaagatggtcgtg
cgcgagcgcggggaccgcacgcagatcgccgtgctggaggacggggtgctcgtggagcac
ttcgtgacctccgcgggcaccggctcgctggtgggaaacgtctacctgggccgcgtgcag
aacgtgctgcccagcatggaggccgccttcgtcgacatcgggcgcggccgcaacgccgtg
ctctacgccggtgaggtggactgggatgccgccggtctggagggcaaggcccgcaagatc
gagcaggcgctgtccaccggggacagtgtgctggtgcaggtcaccaaggacccggtcggg
cacaagggcgcccggctgaccacccagatcagcctgcccggccgcttcctggtctacgtg
cccggtggcggggccaccggcatcagccgcaagctgccggacaacgagcgcaagcgcctc
aaggacatcctcaagcgggtcgtgcccgaggacgccggtgtgatcatccgcaccgcctcg
gagggcatcgccgaggaggagctgggccgggacgtgcagcgcctgcaggcccagtgggag
gtcatcaagcagaaggccgacacgcccaaggcccaggcgccccagctgctctacgaggag
ccggacctgctggtcaaggtcgtgcgggacctgttcaccgaggacttctccgcgctgatc
gtgcagggcgaggacgcctgggacaccatcgacgcctacgtccggcacgtggcgcccgac
ctggccgagcggctgcgcaagcacgtgggcaccaacgacgtgttcaccgagcagcgcatc
gacgagcagatcaccaaggcgctggaccgcaaggtgtggctgccctcgggcggttacctg
gtgatcgaccgcaccgaggcgatgaccgtcatcgacgtcaacaccggcaagttcaccggg
tcgggtggcaacctcgaggagacggtcacccgcaacaacctggagtcggccgaggagatc
gtgcgccagctccggctgcgcgacatcggcggcatcatcgtgatcgacttcatcgacatg
gtgctggagtccaaccgggacctggtgctgcgcaggctcaccgagtgccttggcagggac
cggacccgtcaccaggtggccgaggtgacctcgctgggcctggtgcagatgacccgcaag
cgggtcggcaccggcctgctggaggcgttcagcagcacctgtgagcactgccggggccgg
ggcgtcgtggtgaccgccgagccggtgcactcgcacggcggtggcggcaacaacggcaac
ggcaacaacaacggcaacgggcacgccaacggcggtggccagtccggcggcgggcgcaag
cgcaaccgcaaccggcacgccgacaagcacgaggacgccaagcaccacgaggacgtcaag
cacgaggacgccaagccggagcaggcccagccggaacaggctcagcaggagcaggccccg
gccgagcagcccgccgtgcggccggagccggtgaccagcccggagccggtgaccagcacg
ccggtggcggcgctggaggtcggcaaggccgaggtgtcggtgccctacgaggtgcccgag
cagcccaccctggagcaggccaacgggcaccacgtggccgtggccgagcccgagcgggcc
ccggaggccgcggccaagcccgcgaccgcccgtcgccgctcgcggcgcgctgcctcgcgg
cccgcgggcccgccggtcagcgcggccagccaggactga
DBGET
integrated database retrieval system