Kordia antarctica: IMCC3317_40310
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Entry
IMCC3317_40310 CDS
T06371
Symbol
ddl_2
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
kan
Kordia antarctica
Pathway
kan00470
D-Amino acid metabolism
kan00550
Peptidoglycan biosynthesis
kan01100
Metabolic pathways
kan01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
kan00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IMCC3317_40310 (ddl_2)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IMCC3317_40310 (ddl_2)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
IMCC3317_40310 (ddl_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kan01011
]
IMCC3317_40310 (ddl_2)
Enzymes [BR:
kan01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
IMCC3317_40310 (ddl_2)
Peptidoglycan biosynthesis and degradation proteins [BR:
kan01011
]
Precursor biosynthesis
Amino acid ligase
IMCC3317_40310 (ddl_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_3
CPSase_L_D2
ATP-grasp_4
GARS_A
Motif
Other DBs
NCBI-ProteinID:
QHI38637
UniProt:
A0A7L4ZQ87
LinkDB
All DBs
Position
complement(4661532..4662488)
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AA seq
318 aa
AA seq
DB search
MGGYSNEYAISLKTGSVVYKHLDSEKYSPYKVHIFKDKWVCVTTVGKEFPIDKNDFSVTI
DDIKITFDCVFNAIHGTPGEDGYIQGYLALLGIPQTSCGMYQAALTFNKRDLLSALKPYG
IKCATSYYLNVGDKIDEKAIVAKVGLPCFVKANKAGSSFGISKVYKLEELQNAVAVALKE
DDEVIIESFLDGVEVSVGVINFKGKITVLPITEIVSDNDFFDYEAKYLGKSQEITPARIS
TEMAEKVSKIAKNIYKILKMEGFSRSEFIFKDDEPHLLEVNTVPGMTEESILPQQAKAAR
ISLPELFGNAVELALAKK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgggcggttattctaatgaatacgccatttcacttaaaactggaagtgtagtttataaa
catttagacagcgaaaaatatagtccgtacaaggttcatatttttaaagataaatgggtt
tgtgtcactactgttggaaaggaatttccaattgataaaaatgatttttccgtaactatt
gacgatattaaaattacgtttgattgtgtgtttaatgcaattcatggaacgcctggagaa
gatggttatattcaaggatatttagcgcttttaggaattccacagacaagttgtggaatg
taccaagcagcactgacgtttaataaacgtgatttattgtctgccttaaaaccctatgga
attaaatgtgcgacttcgtattatttgaatgttggtgataaaattgatgaaaaagcaatt
gttgccaaagttggtttgccatgttttgtgaaagcgaataaagcaggaagtagttttgga
atttcgaaagtttataaactagaagaattacaaaatgcggttgctgttgcactgaaagaa
gatgatgaagtgattattgaatcgtttttggatggtgtagaagtttctgttggagtaatt
aattttaaaggaaaaattaccgtattgccaattaccgaaattgtgtctgataatgacttt
tttgattatgaagcaaagtatttaggcaaatcgcaagaaattacgcctgcacgaatttcg
actgaaatggctgaaaaagtatccaaaattgccaaaaacatctataaaattttaaaaatg
gaaggtttttcgcgaagtgaatttatttttaaagacgatgaacctcatcttttagaagta
aatacagttcctggaatgaccgaagaaagtattttgccacaacaagcaaaagcagcaaga
atttcattgcccgaattatttgggaatgctgttgaattggctttggctaaaaagtag
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