Candidatus Kirkpatrickella diaphorinae: N5W20_00330
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Entry
N5W20_00330 CDS
T09554
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
kdp
Candidatus Kirkpatrickella diaphorinae
Brite
KEGG Orthology (KO) [BR:
kdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kdp03021
]
N5W20_00330 (rpoH)
Transcription machinery [BR:
kdp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
N5W20_00330 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
DUF1378
UCR_14kD
Sigma70_r3
HTH_25
Motif
Other DBs
NCBI-ProteinID:
UYH52310
LinkDB
All DBs
Position
complement(60686..61582)
Genome browser
AA seq
298 aa
AA seq
DB search
MGPEASLTRYLQQIRRFPLLTADEESRLARLWRDRQDANAAHKLVTSHLRLVAKIAMGYR
GYGLPVSELISEGNVGMMQAVKRFDPERGFRLATYAMWWIRAAMQEYILHSWSLVKIGTT
AAQKKLFFNLRRLKGQMQAIDDGDLKPEQVDQIAKALGVSDVEIVSMNRRLTAPDRSLNA
PLKNDGEGEWQDWLVDEGANQEKRLGEAEELSGRQDMLSKALLTLNPRERHILHQRRLKE
EPSTLEDLSHHYNVSRERIRQIEARAFEKLQKAMSAEVEARRLSNAKLVAQRHAEMVK
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgggtccggaagcaagcttgacccgttatttacagcagatccgccgttttccacttctt
acagcggatgaggaaagccgcctggcccgcctttggcgtgatcgacaggatgcaaacgca
gcccacaaacttgtaacgtcccatttgcgcctggtcgcgaagattgcgatgggctatcgt
ggctatggcctccccgtcagtgaactcatcagtgaaggcaatgtcgggatgatgcaggcg
gtcaaacgctttgaccctgagcgcggctttcggctggcgacatatgccatgtggtggatc
cgcgccgccatgcaggaatatattcttcatagctggtctctcgttaaaatcggtacgaca
gcggctcagaaaaaactgttcttcaatttgcgccgcctgaaaggccagatgcaggccatt
gatgatggtgacctcaagccggaacaggtggaccagatcgccaaagcactcggcgtgtcg
gatgtggaaatcgtctccatgaatcgccgcctgacagctccggaccgcagtctgaatgcc
ccgttgaagaacgatggcgagggtgagtggcaggattggctggtggatgaaggcgcgaat
caggaaaagcgtctgggagaagctgaggaattatccgggcgacaggacatgctctccaaa
gccctgctgacgcttaacccgcgtgagcgccatattctgcatcagcgtcgtttaaaggag
gagccttcaactttggaggatctctcgcaccattataatgtttctcgcgagcgtatccgc
cagattgaggcgcgggcgtttgaaaaactgcagaaagccatgtcggcggaggtcgaggcg
cgtcgcctctctaacgcgaagctggtcgcgcaacgtcatgccgagatggtgaaataa
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