Candidatus Kirkpatrickella diaphorinae: N5W20_03325
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Entry
N5W20_03325 CDS
T09554
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
kdp
Candidatus Kirkpatrickella diaphorinae
Brite
KEGG Orthology (KO) [BR:
kdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kdp03009
]
N5W20_03325
Enzymes [BR:
kdp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
N5W20_03325
Ribosome biogenesis [BR:
kdp03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
N5W20_03325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Ubie_methyltran
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_12
FtsJ
Methyltr_RsmF_N
PCMT
Methyltransf_15
DAC
Methyltransf_23
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
UYH51901
LinkDB
All DBs
Position
complement(730949..732241)
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AA seq
430 aa
AA seq
DB search
MTPKARLSSAIDLLCAIENHPRRPADATANQFFRDRRFIGGGDRRAISGIVWDVLRKWKR
LHWHLTPIDGGASPRLLCAASLIFSGEAVSDVARLFDGDRFAQSPLSMREARGLEALAGR
TLDDAAMPQDVRLEYPKFLEETLVARFGDRLEEEMRAMDAPAPLDLRVNLLKSDRASAKK
NLAEEQIHVTETPLSPWGLRAPSRLSVTGTAAFKEGWIEIHDEGSQLIAACVDPQPGERI
VDFCAGAGGKTLALAMLMENRGHITACDVSAPRLEGAVKRLRRAGVHNVERHIFTSGDKW
VKRREGRFDRVLVDAPCSGSGTWRRNPDARIHLSRNDIEELVVKQARILDTAARLVRPGG
RLVYATCSLLPAENEDQIAAFCQRHDAFSPTAPDSAHLPPHLRGEKQLSLTPATNHTDGF
FAATLVRKDA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgacccctaaagcacgtttatcttctgccattgatctcctctgcgcgatcgaaaatcac
ccgcgccgcccggctgacgccacggccaaccagttcttccgtgaccgtcgctttattggt
ggcggtgaccggcgcgcaatttccggcattgtgtgggacgttctgcgcaagtggaagcgc
ttgcattggcacctgacccccattgatggcggcgcgtccccccgtcttctctgcgctgca
tcgctaattttctccggtgaggcggtgtcggatgtagcgcgtctttttgacggggatcgc
ttcgcgcaatctcccttatccatgcgggaggcgagagggctggaagccctggccgggcgc
acattggatgatgcggccatgccgcaggacgtgcggctggaatacccgaaattcttggaa
gagacgctggtcgcgcgttttggtgaccggctggaggaagagatgcgcgccatggatgcg
cccgccccgctcgaccttcgggtgaacctcctgaaatctgatcgtgcttcagcaaagaaa
aatctggcggaagagcagatccacgtcacagaaacgcctttatcgccctggggcctgcgc
gcgccgtcgcgcctgtccgttaccggtacggctgccttcaaggagggttggattgaaatc
cacgatgagggcagccagctcatcgcagcctgtgtcgacccgcagccgggagagaggatc
gttgatttctgcgccggggcaggcggcaagacgctggccctcgccatgctcatggaaaat
cgcggtcatatcaccgcctgcgatgtctccgcaccacgattggaaggtgcggtcaaaaga
ctgaggcgggcaggcgttcacaatgtcgagcgccatattttcacatccggtgataaatgg
gtcaaaaggcgggaagggcggtttgatcgcgtgctggtggacgcgccctgctcaggctcc
ggcacatggcggcgtaatcctgatgcgcggattcacctttccagaaatgacattgaggaa
cttgtcgtcaaacaggcccggatcctcgacacggctgcgcggctcgtccgtccgggtggg
cggcttgtttatgccacatgctccctccttccggcggagaatgaggatcagattgctgca
ttctgccagcgccatgacgccttttcaccgaccgcgccggattctgcgcaccttccgccc
catctgcgcggagagaagcaactcagcctgacgcccgcgacaaaccacacggacggtttt
ttcgccgcgactctggtaaggaaagacgcgtaa
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