Kribbella flavida: Kfla_2997
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Entry
Kfla_2997 CDS
T01155
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
kfl
Kribbella flavida
Pathway
kfl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Kfla_2997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kfl03400
]
Kfla_2997
Enzymes [BR:
kfl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Kfla_2997
DNA repair and recombination proteins [BR:
kfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Kfla_2997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ADB32062
UniProt:
D2Q1S3
LinkDB
All DBs
Position
complement(3188336..3189121)
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AA seq
261 aa
AA seq
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MPEGDTVWRATKRLHQALAGKVLVKSDFRVPALATTDLSGETVVEVVPRGKHLLMRISNG
VTIHSHLRMEGSWHLYRPGERWKGGPDYQVRAVLGTDAWTAVGYRLPVLELVATDAENTV
VGHLGPDILSPTFDRTQAIANLAADPDRTISEALLDQRNLAGIGNFYRVEVCFLLGLHPW
KPVSQVDLGAAVDLSRRLMKANLQNAAQVTTGVNRPGQRSWVFERAGKPCRRCRTTILTA
HLGQPPQDRVTFWCPHCQPEN
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagggagacaccgtctggcgggcgaccaagcggcttcaccaggcgctggccggc
aaggtgctggtcaagagcgacttccgcgtgccggcgttggcaacgaccgacctgagcggc
gagacggtcgtcgaggtggttccccgcggcaagcatctgctgatgcggatctccaacggg
gtaacgattcacagccacctgcggatggagggcagctggcacctctaccgcccgggtgaa
cggtggaagggcgggcctgactaccaagtgcgcgccgtcctgggaaccgacgcctggact
gccgtcgggtaccggctgcccgtcctggagttggttgccaccgacgccgagaacaccgtc
gtggggcatctcgggccggacattttgtcgccgaccttcgaccggacgcaggcgatcgcg
aacctcgccgccgatccggatcgcacgatcagcgaagccttgctggaccagcgcaacctg
gccggcatcggcaacttctaccgtgtcgaagtgtgcttcctgctcggcctgcacccgtgg
aagccggtctctcaggtcgatctcggcgctgccgtcgatctgagccggcggctgatgaag
gccaacctgcagaacgccgcccaggtcaccaccggggtgaaccggccgggtcaacgctcc
tgggtgttcgagcgcgccggcaagccctgccgacgctgccgcaccaccatcctgaccgcc
cacctcggtcagcccccgcaggaccgcgtcaccttctggtgcccccactgccagcccgag
aactga
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