Kocuria flava: AS188_09045
Help
Entry
AS188_09045 CDS
T04206
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kfv
Kocuria flava
Pathway
kfv03030
DNA replication
kfv03430
Mismatch repair
kfv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AS188_09045
03430 Mismatch repair
AS188_09045
03440 Homologous recombination
AS188_09045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kfv03032
]
AS188_09045
03400 DNA repair and recombination proteins [BR:
kfv03400
]
AS188_09045
Enzymes [BR:
kfv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AS188_09045
DNA replication proteins [BR:
kfv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AS188_09045
DNA repair and recombination proteins [BR:
kfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AS188_09045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ALU41171
UniProt:
A0A0U3GPQ4
LinkDB
All DBs
Position
2029751..2033239
Genome browser
AA seq
1162 aa
AA seq
DB search
MLDGAARLDDLFEACHELGMTSLASTDHGYVFGAFDFWDKARNAGIKPIIGVEAYLTPGT
ARGDRTRVKFADGGRDDVSGGGAYTHMTLLAETTEGMQNLFRASSLASLEGQLYKPRMDR
ELLSTYGKGLIATTGCPSGEVQTRLRLGQYQEARAAAAEFRDIFGAENFYCELMDHGLGI
EKQVTSDLLRLAKDLQLPLVATNDLHYTHAEDAKSHAALLCVQSGSTLADPKRFKFDADE
FYLKSPAEMRELFRDFPEACDNTLEIAERCNVEFDTSANYMPRFPVPEGEDEESWFVKEV
QKGMHHRFPGGIPEECQRQADYEIGIIVQMGFPGYFLVVADFINWAKNNGIRVGPGRGSG
AGSMVAYAMRITELNPLDHGLIFERFLNPERVSMPDFDVDFDDRRRSEVIRYVTEKYGDE
RVAMIVTYGTIKAKQALKDSSRVLGYPFSMGERLTKAMPPDVMGKGISLKDVYDSSAKRH
GEAEELREILAEDPEAKKIFETAQGLEGLKRQWGVHAAGVIMSSHPLIDVIPIMRREQDG
QVITQFDYPTCEGLGLIKMDFLGLRNLTIISDALENIAFNRDGFELDLETLALDDAASYE
LLGRGDTLGVFQLDGGPMRQLLKLMRPDNFEDISAVLALYRPGPMGVNSHTNYALRKNGQ
QEITPIHPELEEPLAEILDTTYGLIVYQEQVMAAAQKLANYSLGQADLLRRAMGKKKKSE
LDKQQAVFFEGMQANGYSLDACQTLWNVLESFSDYAFNKAHTAAYGLVSYWTAYLKAHYP
AEYMAALLTSVGDDKDKLALYLNECRRMGITVLPPDVNESALNFTPVGTDIRFGMGAVRN
VGANVVTAMVEAREEKGEFTSFNDFLAKVPAVVCNKRTIESLVKAGAFDRLGHTRRGLVM
CHEEAVDATVAVKRQEAAGQFDLFGGMGLDEDDPTASLTVAVPEVPEWERKDLLAFEREM
LGLYVSDHPLRGLDEALGQYADTAVQPLLGEDGRPDGAVVTVAGMITSLSRRIAKTSGNA
YARVELEDRTGSIEVMFFGKAYAPIAGVLAEDLICVIKGRLQRRDDGSVTISAQELTVPE
LSADGHSGPVLIALPEFRATEATVKEIGAVLRNHRGDSEVRIHLETRQKVQVLRLGPDLR
VNPSPALFGDLKVLLGPTCLEV
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacggcgcggcccgcctcgacgacctcttcgaggcctgccacgagctcggcatg
acgtccctggcgagcaccgaccacggctacgtgttcggcgccttcgacttctgggacaag
gcccgcaacgccgggatcaagcccatcatcggcgtcgaggcgtacctgaccccgggcacc
gcccgcggcgaccgcacgcgcgtgaagttcgccgacggcgggcgcgacgacgtctccggc
ggcggcgcctacacccacatgaccctgctcgcggagaccaccgagggcatgcagaacctc
ttccgcgcctcctccctggcctccctcgagggccagctgtacaagccccgcatggaccgg
gagctgctcagcacctacggcaagggcctgatcgccacgaccggctgcccctccggggag
gtccagacccggctgcgcctgggccagtaccaggaggcccgggccgccgcggccgagttc
cgcgacatcttcggggccgagaacttctactgcgagctcatggaccacgggctcgggatc
gagaagcaggtcacctcggacctgctcaggctcgccaaggacctgcagctgccgctcgtg
gcgaccaacgacctgcactacacccacgccgaggacgcgaagtcccacgcggcgctgctg
tgcgtgcagtcgggctcgacgctggccgaccccaagcggttcaagttcgacgccgacgag
ttctacctgaagtccccggcggagatgcgcgagctcttccgcgacttccccgaggcctgc
gacaacaccctcgagatcgccgagcgctgcaacgtcgagttcgacacctccgcgaactac
atgccgcgcttcccggtgcccgagggcgaggacgaggagtcctggttcgtcaaggaggtg
cagaagggcatgcaccaccggttcccgggcgggatcccggaggagtgccagcgccaggcc
gactacgagatcggcatcatcgtccagatgggcttccccggctacttcctcgtcgtggcc
gacttcatcaactgggccaagaacaacggcatccgcgtgggcccgggccgcgggtcgggg
gccggctccatggtcgcgtacgcgatgcgcatcacggagctgaacccgctcgaccacggg
ctgatcttcgagcgcttcctcaaccccgagcgcgtgtccatgcccgacttcgacgtcgac
ttcgacgaccgccgccgctccgaggtgatccgctacgtcaccgagaagtacggcgacgag
cgggtggcgatgatcgtcacctacggcacgatcaaggccaagcaggccctgaaggactcc
tcccgcgtgctcggctacccgttctccatgggcgagcggctcaccaaggccatgccgccg
gacgtcatgggcaagggcatctccctcaaggacgtctacgactcctccgccaagcgccac
ggggaggccgaggagctgcgcgagatcctggccgaggaccccgaggcgaagaagatcttc
gagaccgcccagggcctcgaaggcctcaagcgccagtggggcgtgcacgccgccggcgtg
atcatgtcctcgcacccgctcatcgacgtcatcccgatcatgcgccgcgagcaggacggc
caggtcatcacgcagttcgactaccccacgtgcgaggggctcgggctgatcaagatggac
ttcctgggcctgcgcaacctcacgatcatctccgacgccctggagaacatcgcgttcaac
cgggacggcttcgagctcgacctcgagaccctcgccctcgacgacgccgcctcctacgag
ctgctggggcgcggcgacaccctcggggtgttccagctcgacggcgggccgatgcgccag
ctgctcaagctcatgcgcccggacaacttcgaggacatctcggcggtgctcgccctgtac
cggcccgggcccatgggcgtgaactcgcacaccaactacgcgctgcgcaagaacggccag
caggagatcaccccgatccacccggagctcgaggagccgctcgcggagatcctcgacacc
acctacgggctgatcgtctaccaggagcaggtcatggccgcggcgcagaagctggccaac
tactccctgggccaggcggacctgctgcgccgggcgatgggcaagaagaagaagtccgag
ctggacaagcagcaggcggtcttcttcgaggggatgcaggccaacggctactccctggac
gcctgccagacgctgtggaacgtcctggagtccttctccgactacgcgttcaacaaggcc
cacaccgccgcctacgggctcgtctcctactggacggcctacctcaaggcccactacccg
gccgagtacatggccgcgctgctgacctcggtgggcgacgacaaggacaagctcgcgctc
tacctcaacgagtgccggcggatgggcatcaccgtcctgcccccggacgtcaacgagtcg
gccctgaacttcacccccgtcggcacggacatccgcttcggcatgggcgcggtgcgcaac
gtcggcgcgaacgtggtcaccgcgatggtcgaggcccgcgaggagaagggggagttcacc
tccttcaacgacttcctggcgaaggtcccggccgtcgtgtgcaacaagcgcaccatcgag
tcgctcgtaaaggccggggccttcgaccgcctcggccacacccgccgggggctggtgatg
tgccacgaggaggcggtcgacgcgaccgtggccgtcaagcgccaggaggccgccggccag
ttcgacctgttcggcggcatgggcctggacgaggacgacccgacggcgtccctgaccgtc
gcggtcccggaggtgcccgagtgggagcgcaaggacctgctcgccttcgagcgggagatg
ctggggctctacgtctccgaccacccgctgcgcgggctcgacgaggcgctgggccagtac
gcggacaccgcggtccagccgctgctgggggaggacgggcgccccgacggcgccgtcgtg
acggtcgcggggatgatcacctccctgtcgcggcggatcgcgaagacctccggcaacgcc
tacgcccgcgtggagctcgaggaccgcacgggctcgatcgaggtgatgttcttcggcaag
gcctacgcgcccatcgccggcgtgctcgccgaggacctgatctgcgtgatcaagggccgg
ctgcagcgccgcgacgacggctcggtgaccatctccgcccaggagctcaccgtgcccgag
ctcagcgccgacgggcacagcgggccggtgctcatcgcgctgccggagttccgggccacc
gaggcgaccgtcaaggagatcggcgcggtcctgcgcaaccaccgcggcgactccgaggtg
cgcatccacctcgagacccggcagaaggtgcaggtgctgcgcctgggaccggacctgcgg
gtcaacccgtcgccggcgctgttcggcgacctcaaggtcctgctcggacccacctgcctg
gaggtctga
DBGET
integrated database retrieval system
