Kangiella geojedonensis: TQ33_0369
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Entry
TQ33_0369 CDS
T03889
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
kge
Kangiella geojedonensis
Pathway
kge03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TQ33_0369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kge03400
]
TQ33_0369
Enzymes [BR:
kge01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
TQ33_0369
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TQ33_0369
DNA repair and recombination proteins [BR:
kge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TQ33_0369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AKE51356
UniProt:
A0A0F6RBR4
LinkDB
All DBs
Position
complement(382064..382873)
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AA seq
269 aa
AA seq
DB search
MPELPEVETTTRGLAPHVTGQTVTTVNIYQPQLRWPIPKELTQLEGQTSGDITRRAKYML
WNFPQGSVVMHLGMSGTMRVVDAETPLKKHDHFEVVFANGKALRLNDPRRFGAVLWQEKN
TELSIIQSLGPEPLSNHFDGNYLHQKLAKRKGAIKNAIMTNAVVVGVGNIYASESLFLSG
IHPKRAANRVSKERCQLLANNIKLVLKKAIQQGGTTLKDFTQADGSPGYFAQQLNVYGRE
GESCAQCQSIIKNMTLGQRSSFYCPKCQR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattacccgaagttgaaaccacaactcgaggacttgcccctcatgttacaggg
caaacagtcaccacagtgaatatctatcagcctcaactgcgctggccgattcctaaagag
ctcacacagcttgaaggccaaaccagtggcgatatcacacgccgcgcgaaatacatgctg
tggaacttcccccaaggctcggttgtgatgcacctcggtatgtccggcaccatgcgagtg
gtcgatgcagaaacaccactcaagaaacatgaccactttgaagtagtttttgcaaacggt
aaagcactccgccttaatgacccgagacgtttcggggctgttttatggcaagaaaaaaat
acagaactgagcattatccaatctcttggcccagagcctttaagcaaccactttgatggt
aactacctccatcaaaaactcgctaagcgcaaaggcgctatcaaaaacgcgatcatgact
aacgcggtggtcgttggcgttggtaacatctatgctagcgagtcgctatttttaagtggc
attcaccccaaacgtgccgccaaccgcgtcagcaaagaacgttgccagctactcgccaat
aatataaagctagtgcttaaaaaagccatacaacaaggcggcaccaccctgaaagacttt
acgcaagctgacggctctccaggctacttcgcgcaacagctgaacgtttatgggcgcgaa
ggcgagtcttgcgctcaatgccaatctatcattaaaaatatgacactagggcaacgttct
agtttctactgcccaaagtgtcaacgttaa
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