Kocuria indica: KocCE7_03950
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Entry
KocCE7_03950 CDS
T05866
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
kii
Kocuria indica
Pathway
kii03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KocCE7_03950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kii03400
]
KocCE7_03950
Enzymes [BR:
kii01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
KocCE7_03950
DNA repair and recombination proteins [BR:
kii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KocCE7_03950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QBJ21090
UniProt:
A0A4P6RNX6
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All DBs
Position
872801..873394
Genome browser
AA seq
197 aa
AA seq
DB search
MGFSRAELDSYRDRTVPDLLPQPLRLLFVGINPGLWTAATGAHFARPGNRFYPALHRAGI
TPTLINAADGYVPEELAQLTDRGIGISNVCPRATARADELTAEEFHEGAQRLDRLVRAEH
PAVVAVLGITAYRAAFDRPKAVTGRQDSPWPGTELFVAPNPSGLNAHSSLDDLARIYGDI
ARAAGIAVDPGGHPSKR
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgggattctcacgcgccgaactcgactcctaccgggatcgcactgtcccggatctgctg
ccccagccgttgcggctgttgttcgtgggtatcaacccggggctgtggaccgccgcgacc
ggtgcgcacttcgcccggccgggtaaccggttctacccggcgctgcaccgcgcggggatc
accccgaccctgatcaacgccgccgacggctacgtcccggaggagctggcgcaactgacc
gaccgggggatcgggatcagcaacgtgtgtccccgggccactgcgcgggcggatgagctc
accgcggaggagttccacgagggggcacagcggctggaccgactggtccgcgcggagcat
cccgccgtggttgcggtgctcggcatcaccgcgtaccgcgcggccttcgaccgccccaag
gccgtcacggggcggcaggattcaccgtggccgggcaccgaactgttcgtggcacccaac
cccagcggtctcaacgcccacagctccctggacgacctcgcgcggatctacggtgacatc
gcccgcgccgcgggcatcgccgtcgaccccggaggacacccctcgaagcgttga
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