Kangiella koreensis: Kkor_2225
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Entry
Kkor_2225 CDS
T00973
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
kko
Kangiella koreensis
Pathway
kko03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Kkor_2225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kko03400
]
Kkor_2225
Enzymes [BR:
kko01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Kkor_2225
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Kkor_2225
DNA repair and recombination proteins [BR:
kko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Kkor_2225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zf-ribbon_3
Motif
Other DBs
NCBI-ProteinID:
ACV27634
UniProt:
C7R7V1
LinkDB
All DBs
Position
2420840..2421649
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVETTKNGLAPHIVGKRITAVNIYQPQLRWPVAEEATTLVGLVSSDIERRAKYML
WHFSTGSLVMHLGMSGTMRVVSAQSALKKHDHFEVVFDDRTALRFNDPRRFGAILWQPKG
ETLKVLSQLGPEPLSDDFDGQYLHQALTKRKGAIKNAVMDNKVVVGVGNIYASESLFMSG
IHPKRAANKVSLARCKLLAGFIKTVLEKAIGEGGTTLKDFTQTDGSPGYFAQQLNVYGRA
DLPCNQCGAIIKKQVIGQRSSFYCPKCQR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacccgaagttgagaccactaagaatgggctggccccacatattgtcggc
aaacgaattactgcggtaaatatctaccagcctcagctgcgctggcctgtcgctgaagag
gccaccacattagttggcttggtatcgagcgatattgaacgacgcgctaaatatatgctg
tggcacttttcgaccggcagcctagtcatgcacttagggatgtcaggtaccatgcgcgta
gtcagcgcccaaagcgctttaaaaaaacatgaccatttcgaagtcgtatttgatgatcgt
accgccttgcgctttaacgacccgcgacgctttggcgccatcctttggcagcctaaaggg
gaaaccctgaaagtactcagtcagcttggcccagagcccttaagtgatgactttgatggg
caatacctacatcaggctttaaccaagcgcaagggcgcaatcaaaaacgccgttatggac
aataaggtggtagttggtgtcggcaatatttatgccagtgaatcactttttatgagcggc
atacatcctaagcgcgcagctaacaaagtcagtctggctcgctgcaagttactcgctgga
tttatcaaaacggttctagaaaaagccatcggcgagggtgggacaacattaaaggacttc
acacaaactgacggttcaccgggctactttgctcagcaattaaatgtgtatggtcgtgct
gacttgccttgtaaccagtgtggcgccatcatcaagaaacaggtcattgggcaacgatct
agtttctactgccccaaatgccaacggtag
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