Pantoea rwandensis: LH22_01955
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Entry
LH22_01955 CDS
T03331
Name
(GenBank) selenocysteinyl-tRNA-specific translation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
kln
Pantoea rwandensis
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
kln03012
]
LH22_01955
Translation factors [BR:
kln03012
]
Eukaryotic type
Elongation factors
LH22_01955
Prokaryotic type
LH22_01955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
bact_SelB_WH_2nd
SelB-wing_3
SelB-wing_2
SelB-wing_1_3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
SRPRB
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AIR84282
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Position
442996..444846
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AA seq
616 aa
AA seq
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MIIATAGHVDHGKTALLQALTGVDADRLPEEKRRGMTIDLGYAYWPQPDGRVVGFIDVPG
HEKFLANMLAGIGGIHHALLVVACDDGVMPQTREHLQLLSLAGQPPLSVALTKADRVDAV
RIAEVQHQVAELTQQLGWLAVPQFVTSSTTQQGIDTLRQHLGQLCAPAIDTHRRFRLAID
RAFTLKGSGLVVTGTALSGEVSVGDTLWLSSLNRPVRVRSLHAQNQSVTRAQAGERIALN
IVGDVEKDQIARGDWLLAQPQPSGTLRLIVALRLLQPLKNPSQPVHLHHAASHVTGRLNL
IAGELAELVLNEPLWLAENDRLIIRDSNAQLTLGGGRVLLLNSKKRGKRHPDYLGWLQQL
AAAEADEESLQAHLAQQPIDMAELSWARQLSDDALNNLLDSVAPVRLGSAIMAAEQANDW
QQRLLAALTAFHQQHPEVPGIGRDRLRRVALPHQPPEQVLALIDRLLSQGQLQHRQGWLH
LPDFEPRFNPQEETLWQQVDPLFSDQPLWVRDIALATQQDEETIRSLLLTAARLGHITAI
VRDRYYRSDQIQIFADLIRQRDANGGSTSAADFRNQLGTGRKIAVQILEFFDRSGFTRRR
GNDHLLRDARLFDTRT
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgccaccgctggacacgtcgatcacggtaaaactgcgctgttacaggcgctc
accggtgtcgatgccgatcgcttgccagaagagaaacggcgcggcatgactattgatctc
ggctacgcctactggccgcaaccggatggccgcgttgtgggctttatcgatgtgcccgga
cacgagaaattcctcgccaatatgctggcgggcatcggcggtattcatcatgccttattg
gtggtggcgtgcgatgacggtgtgatgccgcaaacacgtgagcatttgcaactactgagt
ctggccgggcaacctccacttagcgttgccttgaccaaagcagatcgcgtggacgccgta
cgcatcgccgaagtgcagcaccaggtggcggagttaacgcagcaactgggctggctggcg
gtaccgcagtttgtcaccagtagcaccacccagcaaggcatcgacacgctgcgccagcat
ttgggtcaactatgcgcaccggctatcgacacgcaccgccgctttcgcctcgccattgat
cgtgcatttaccctcaaaggcagcggattagtggtcaccggcaccgccctttcgggtgaa
gtcagcgtgggcgacaccttatggctcagcagcctcaatcgacccgtacgcgtgcgttct
ctgcatgcgcagaatcagtcagtcacacgtgcgcaggccggagaacgcatcgcattgaat
atcgttggcgatgtggagaaagaccagattgcgcgcggtgactggctgctggcacaacca
caaccctcgggcaccctgcgactgatcgtggcgctgcgtttgctacagccgttaaaaaat
ccctcgcagccagtccatcttcaccatgccgccagccatgtgactggcagactgaatctg
attgcgggcgaactggcggaactggtgctcaacgagccgctgtggctggcggaaaacgat
cggctgattatccgcgacagcaatgcacagctcacgctcggtggcggacgggtgctgctg
ctgaacagcaagaaacgcggcaagcgccatcctgattatcttggctggctgcaacagctg
gcggcagcggaagccgatgaagagagtttgcaggcgcacctggcacagcaacccatcgac
atggccgagctgagttgggcacgccagctgagtgacgatgcactcaacaacctgctggac
agcgtggcgcccgtgagactcggcagcgccatcatggctgcggaacaggccaatgactgg
cagcagcgactgctggcagcgctcaccgcgtttcatcagcagcaccctgaagtgccgggc
attggtcgcgatcgcttgcgtcgcgtggctcttccccaccaaccgccggaacaggttctc
gcactgatcgatcggctgctttcacaaggccagttgcagcaccgccaaggctggctgcat
ttgcctgattttgaacctcgcttcaatccccaggaagaaacgctgtggcagcaggtcgac
ccactgttcagcgaccagccgctatgggtacgcgacattgcactggcgacccagcaagat
gaagaaaccattcgcagcctgctgctcaccgccgcgcgcctcggtcatattacggcgatc
gtccgcgatcgctactaccgcagcgaccagatccagatcttcgccgatctgattcgccag
cgtgacgccaacggtggcagcaccagcgccgccgatttccgcaaccaactcggcaccgga
cgaaaaatcgcggtacagattctggaattcttcgaccgcagcggcttcacccgccgtcgc
ggtaacgatcacctgttgcgcgacgcccgcctgttcgacacccgcacttaa
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