Koleobacter methoxysyntrophicus: H0A61_00016
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Entry
H0A61_00016 CDS
T07090
Symbol
nfo
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
kme
Koleobacter methoxysyntrophicus
Pathway
kme03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H0A61_00016 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kme03400
]
H0A61_00016 (nfo)
Enzymes [BR:
kme01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
H0A61_00016 (nfo)
DNA repair and recombination proteins [BR:
kme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
H0A61_00016 (nfo)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DUF2124
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QSQ07700
UniProt:
A0A8A0RJ81
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Position
complement(13397..14233)
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AA seq
278 aa
AA seq
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MYIGAHISISKGYEKAVKQAVEIGCNTMQFFTRNPRGSKAKALDADDLARADEYRKETSF
GPMVAHAPYTLNLASFKEDTWDFAKMVMKEDLKRLEAIGASYMVVHPGSHLGYGLEYGIQ
RIADALNEIITGSERVMILLEGMAGVGTEIGYTFEQLEEIIARVDKQENLGVCFDTCHLY
CAGYDVKDDLNTVLEELDKVIGIYRLKAFHLNDSKNPLGSRKDRHENIGEGELGIETFEN
IINHPELKDIPFLLETPGGIDVFEKEIRLLRTLVKEKI
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcggtgcccatatatcaatttcaaaaggttatgaaaaggcggtgaagcaggcg
gttgaaatcggttgtaatacgatgcagttttttaccaggaatcccagaggcagtaaggct
aaagccctggatgctgatgatctggccagagcggacgaataccgcaaagaaacctctttt
ggcccgatggtagcccatgccccttatacattgaaccttgcttcttttaaagaagatacc
tgggatttcgctaaaatggtaatgaaggaagacctgaaaagattagaagcaataggggca
tcctatatggttgtccatcccggaagccatctcggttatggtctggaatacggtattcag
aggattgccgatgcccttaatgagattatcactggtagtgaaagggtcatgatcctgctg
gaagggatggcgggagtaggcacggaaataggttatacctttgaacagctggaggaaata
atagccagggtcgataaacaggaaaacctgggggtttgtttcgatacctgtcatctttat
tgtgccggatatgatgttaaggatgatctgaataccgtactggaagaactggataaggtt
atcggcatttacaggttaaaggcctttcatttaaatgacagtaaaaacccccttggaagt
cgaaaggacagacatgaaaacataggagaaggtgagctcggcattgaaacctttgaaaat
atcataaatcaccctgaacttaaggatattccgttccttctcgaaacacccggcggaata
gatgtttttgaaaaagaaatcaggcttttaaggaccctggtcaaggagaaaatttaa
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