Klebsiella michiganensis RC10: VW41_17800
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Entry
VW41_17800 CDS
T03782
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kmi
Klebsiella michiganensis RC10
Pathway
kmi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kmi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VW41_17800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmi03019
]
VW41_17800
03400 DNA repair and recombination proteins [BR:
kmi03400
]
VW41_17800
Enzymes [BR:
kmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VW41_17800
Messenger RNA biogenesis [BR:
kmi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
VW41_17800
DNA repair and recombination proteins [BR:
kmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VW41_17800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
zf-CCCH_8
Motif
Other DBs
NCBI-ProteinID:
AJZ90745
LinkDB
All DBs
Position
complement(3857532..3859361)
Genome browser
AA seq
609 aa
AA seq
DB search
MAQAEVINQASLARQVLQDTFGYQQFRPGQETIIDTVLEGRDCLVVMPTGGGKSLCYQIP
ALVFGGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLY
IAPERLMMDNFIDHLSNWQLSMVAVDEAHCISQWGHDFRPEYAALGQLRERLPAVPFVAL
TATADDTTRLDIVRLLGLHEPFIQISSFDRPNIRYMLMEKFKPLDQLTRYIQEQRGKSGI
IYCNSRAKVEDIAARLQSKGISAGAYHAGLEHQVRGEVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVAHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRKCLEEKAPGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQQSCGNCDICLDPPRRYDGLMDAQKAL
SCIYRVGQRFGMGYVVEVLRGANNQRIRDLGHDKLKIYGEGREHTTEHWVSVIRQLIHLG
VVTQNIAAHSALQLTEAARPYLRGEEPLMLAVPRVVAIKPRASQKVFGGNYDRKLFAKLR
KLRKSIADEENIPPYVVFNDATLIEMAEQMPLSPGEMLGINGVGTRKLERFGRPFMTLIR
DHVDGVDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcacaggcggaagtaatcaatcaggcgtcgctggcgagacaggttctgcaggatacc
ttcgggtatcaacagtttcgtccgggccaggaaaccatcatcgatacggtgctggagggg
cgtgactgcctggtggtgatgccgaccgggggcggtaaatccctgtgctatcaaatcccc
gcgctggtgtttggcggcctgaccgtggtggtttccccgctgatttccctgatgaaagac
caggttgatcagctgctggcgaacggcgtggcggcggcctgtcttaactccacccaaact
cgcgaacaacagctggaagtgatgaccggctgtcgcaccgggcaaattcgcctgctgtat
atcgcgcctgagcgcctgatgatggacaacttcatcgaccatctcagtaactggcagctt
tcgatggtggcggtggacgaagcacactgtatttcgcagtgggggcacgatttccgcccg
gaatatgccgcgctcgggcagcttcgcgagcggctgcctgcggtgccgtttgttgcgctg
acggccacggctgacgacactaccaggcttgatattgtgcgcctgctggggctccacgag
ccgttcatccagatcagcagttttgaccgaccgaatatccgctacatgctgatggagaag
tttaaaccgctcgatcagctcactcgctatattcaggagcagcgcggcaagtccgggatt
atttactgcaatagccgggcaaaagtggaagacatcgccgcccgactgcaaagcaaaggc
atcagcgccggcgcctatcacgcgggactggagcatcaggtacgcggcgaagtgcaggaa
aaattccagcgtgacgatctgcaaatcgtggtcgcgaccgtcgctttcggcatgggcatc
aacaagccgaacgtacgttttgtcgcccacttcgatatcccccgtaatatcgaatcttac
tatcaggaaaccggccgtgccgggcgtgatggcctgcctgcggaagcgatgctgttttac
gatccggcggatatggcctggctgcgtaaatgtcttgaagaaaaagccccgggacagctg
caggacattgagcgccacaagctcaacgccatgggcgcctttgccgaagcgcaaacctgt
cgccgcctcgtgctgctgaactacttcggcgaaggtcgccagcagtcttgcggcaactgc
gatatctgcctcgatccgcctcgtcgctatgacggtctgatggacgcgcaaaaagcgctg
tcctgcatttaccgcgtcggccagcgctttgggatgggctacgtagtcgaagtcctgcgc
ggcgccaacaaccagcgaattcgcgatcttggccacgacaaactgaagatttacggtgaa
ggccgcgaacacacgacggaacactgggtcagcgtgattcgccagctcatccacctcggc
gtggtgacgcaaaatatcgccgctcactccgcgctgcagctgacggaagcagcacgtcct
tacctgcgtggtgaggagccgctgatgctggcggtgccgcgagtcgtggctattaagccg
cgcgccagccagaaagtctttggcggtaattacgatcgcaagctgttcgccaaactcaga
aagctgcgcaaatccattgcggatgaagaaaacatcccgccgtatgtggtgtttaacgat
gcaacgctgattgaaatggctgagcagatgccgctgtcgccaggcgagatgctgggtatt
aacggggtggggacgcgtaaacttgagcgctttggccgcccgtttatgacgctgattcgc
gaccacgttgacggcgtggatgaagagtag
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