Kryptolebias marmoratus (mangrove rivulus): 108230643
Help
Entry
108230643 CDS
T05608
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108230643 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108230643 (zcchc7)
03016 Transfer RNA biogenesis [BR:
kmr03016
]
108230643 (zcchc7)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
108230643 (zcchc7)
Transfer RNA biogenesis [BR:
kmr03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
108230643 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
AIR2-like_ZnK4
Zn_ribbon_2
Motif
Other DBs
NCBI-GeneID:
108230643
NCBI-ProteinID:
XP_017262570
UniProt:
A0A3Q2Z9E1
LinkDB
All DBs
Position
LG3:8543769..8598862
Genome browser
AA seq
641 aa
AA seq
DB search
MYSAYQARKDLEDDLYHDGDSEVSEVNSELEFHLYSQLHYSSNAAEIEELGDDEEKENDR
LGLGNQQHEVLEMTEDGDSKLSSSQNDGLRQNKRKKVEKQKKKKKKTDSKGQKLLSSSVF
EEVIVIDSSPDVISISEDETSGDDEGICAVKGRGSSKLLTSTPAQQENQKRKRSPVVPVT
VVSSSSAASESESESESSESDSSDSDGLENWMMLDQGMQDGDQSISLNLKGGSDSSTDAE
DEGGGSWLVSEKDMEAQIYNKDRGSRITVQRASNRYYTGKNVHCKNCNRTGHLSKNCPDP
KRLVPCFLCGTTGHLVSDCPKKHCNNCGHPGHLFSTCHEKAYWYKQCHRCSMKGHFLDAC
PEIWRQYHITTKSGPPVKQQREDKDRSPAYCFNCSKKGHFGFACTRQRMFSGVYPSSPFI
SHYDSVADIKRRQHRTKLKVNEMRRSGHLPALSPTPHAPEAPKKKQKISHHTNNHQPNKT
PGQTPNEHKPSPSHIFFSDSDFSKTASKTKSFRQQQGVGSVKPWKPKRPVPTSRDPLPSS
KLALGEDEDLPRGGGMQPNKKKKKKVNKTTQVSLFQPQGHKGSNSNHLCRTVGGGMQRLA
SNNKKGEKRKNWKNYNNKKVGAQLYPEDDDLFIIKQRKRRR
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtacagtgcctaccaggcccggaaagacttggaggatgatctctatcatgatggagac
tctgaagtgtcggaggtcaacagtgaactggagtttcacctctacagccagctccattac
tcctccaatgctgcagagatagaggagctgggggatgatgaagagaaggagaatgacaga
ctgggtctgggtaaccagcaacatgaggtgctagaaatgactgaagatggtgacagtaaa
ctttcatcatctcagaatgacggtctccggcaaaacaaaaggaagaaggtagagaaacag
aagaagaagaagaagaaaactgactccaaaggtcaaaagttattgtcatcatcagttttt
gaggaggttattgtgatcgactccagccctgacgtcatctccatctctgaggatgagact
tctggtgatgatgagggcatctgtgccgtcaagggacgaggctcgagcaaactactgact
tcaaccccggcacagcaggaaaaccagaagagaaagagaagtcccgttgtgccagtgacc
gtggtttccagcagctcagcagcttccgaatccgaatcagagtctgaatcttcagagtct
gattcatcggattcagatggcctagagaactggatgatgctggatcaagggatgcaggat
ggagaccagtccatctcactcaacctgaaaggaggttctgacagcagcacagatgctgaa
gatgaaggaggaggaagttggttggtttcagaaaaagacatggaggctcagatctataac
aaagacagaggttccaggataacagtgcagcgggcgtccaacagatactatactgggaag
aacgtgcactgtaaaaactgcaacaggaccggacatctctccaagaactgtcccgacccc
aaaaggttggtgccctgtttcctctgtggtacgacaggccacctggtcagcgattgtccc
aaaaaacactgtaacaactgtggccatcctggacacctttttagcacctgccacgagaag
gcctattggtacaaacagtgccatcgctgcagcatgaagggacacttcttggatgcttgt
ccagagatctggagacagtaccacattacaactaagagtggccctcctgtaaagcagcaa
agagaggacaaagatcgatctcctgcctactgcttcaactgctccaagaagggacacttt
ggctttgcgtgcacacggcagaggatgttcagtggggtttatccgagcagcccgttcatc
agtcactacgactctgtggcggacattaaacgcagacaacacaggacaaaactgaaggtt
aatgagatgagaagaagtggtcatttgccagctctttctccaacccctcacgcccctgaa
gcaccaaagaagaaacaaaaaatcagccatcacacaaacaaccaccaacccaacaagaca
cccggccaaaccccgaacgagcacaaacccagtccgagccacatcttcttctcggacagt
gacttcagcaaaacggcgtccaaaacgaagagcttcagacagcagcagggtgtcggcagc
gtcaaaccgtggaagcctaagagacccgtgcccacctcgagagacccactaccatcgagt
aaactagctttaggtgaagatgaagaccttccaagaggaggggggatgcaaccaaacaag
aagaaaaagaagaaagttaataaaacgacgcaggtttctttatttcagccacaggggcac
aaaggcagcaactcgaaccatctctgcaggactgtaggcggagggatgcagaggctggca
tcaaacaataagaagggagagaaaaggaaaaactggaaaaattataataacaaaaaagtc
ggtgcacagctgtatcccgaggacgatgatctatttatcatcaaacaacgaaaacgcaga
agatag
DBGET
integrated database retrieval system
