Kryptolebias marmoratus (mangrove rivulus): 108230807
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Entry
108230807 CDS
T05608
Symbol
rxrgb
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X2
KO
K08526
retinoid X receptor gamma
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03320
PPAR signaling pathway
kmr04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
108230807 (rxrgb)
03320 PPAR signaling pathway
108230807 (rxrgb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108230807 (rxrgb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
kmr03310
]
108230807 (rxrgb)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
108230807 (rxrgb)
Nuclear receptors [BR:
kmr03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
108230807 (rxrgb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
108230807
NCBI-ProteinID:
XP_017262851
UniProt:
A0A3Q3EHB3
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All DBs
Position
LG24:complement(12854460..12884002)
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AA seq
453 aa
AA seq
DB search
MDGSDPYLHLNSSGPMSAGHTHPPSMGSMVGHPSVISTSRPLPSPMSTLGSPMNGLSLPY
PVITSSQGSPSVPLQSAPNMNFGPLNSPQMNSMNSVSSSEDIKPPPGLQPLGNINYQCTS
PGGMSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKECLIDKRQRNR
CQYCRYQKCLAMGMKREAVQEERQRGKERGENEVESTSSFNEDMPVDKILDAELAVEPKT
ETYSDGSPGNSTNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELL
IASFSHRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKTELGC
LRAIVLFNPDAKGLSNPSEVEALREKVYASLESYTKQKYPDQPGRFAKLLLRLPALRSIG
LKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggacggcagtgatccatatttacacctcaattcatctgggccaatgagtgcaggtcac
actcatcccccttccatgggcagcatggtgggccacccctctgttatcagcacctccagg
cccttaccgtcccccatgtccaccctgggctcgccgatgaacggcctgtcattgccctat
cccgtcatcacgtcgtctcagggatcaccctctgtacctctgcagtctgctcccaacatg
aactttggaccgctcaatagcccacagatgaactctatgaacagcgttagcagctcagag
gacatcaagcccccgccgggcctgcagcctctaggaaacatcaactaccaatgtacgagc
ccgggagggatgtcgaaacacatctgtgctatttgtggggatcgctcctcagggaagcac
tacggtgtgtacagctgcgagggctgcaaaggcttcttcaagcgcaccgtccgtaaagat
ctcacctacacatgtcgagacaacaaagagtgcctaatagacaaacgccagcggaaccgc
tgccagtactgtcgctaccagaagtgcctggccatgggcatgaagagagaagctgtgcag
gaagagaggcagcgtgggaaggagcgcggggagaacgaggtggaatctaccagcagtttt
aacgaggacatgcccgtcgacaagatcctggatgctgagctggccgtggagcccaaaaca
gagacgtacagcgatggcagtccaggaaactctaccaacgaccccgtcaccaatatctgc
caagcggcagacaagcagctcttcaccttggtggagtgggccaaaaggatcccccacttc
tccgaactccctctggatgaccaggtcatcctcctacgagcaggctggaacgagctcctc
atcgcctctttctcacatcgctcagtcacggttaaggacggcatcctgctcgccacgggt
cttcacgtccacagaagcagcgcccacagcgccggggtgggatccatctttgacagggtc
ctgacagagttggtttcgaaaatgaaagacatgcagatggataaaacggaactcggctgc
ctgcgagccatcgtcctcttcaacccagacgcaaaaggtttgtcgaacccatcagaggtg
gaggcgctacgagaaaaggtctatgcttcgctggagtcgtatacaaaacagaagtaccca
gaccagcctggcaggttcgccaaactgctgctccgcctccccgctctgcgctccatcggc
ctcaagtgtctggagcatctgttcttcttcaagttaatcggggacacgcccatcgacacc
ttcctgatggagatgctggaggcgccgcatcagatcacatga
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