Kryptolebias marmoratus (mangrove rivulus): 108234712
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Entry
108234712 CDS
T05608
Name
(RefSeq) E3 ubiquitin-protein ligase HECW1 isoform X1
KO
K12167
E3 ubiquitin-protein ligase HECW1 [EC:
2.3.2.26
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108234712
Enzymes [BR:
kmr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108234712
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
HECT type E3
108234712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
HECW_N
HECW1_helix
WW
C2
RFXA_RFXANK_bdg
Motif
Other DBs
NCBI-GeneID:
108234712
NCBI-ProteinID:
XP_017269590
UniProt:
A0A3Q3BJS0
LinkDB
All DBs
Position
LG21:7798749..7875996
Genome browser
AA seq
1606 aa
AA seq
DB search
MLMQLCSFKNLYQNRFLSLAAMATPTRQRFKDATRHSYSPETYAVNGLNQDAFTLALPRS
TSDTDLVSPDTRSTLTVSSAHYVIGQSEDLVITWDIKEEVDAGDWIGMYLVDEALSENFL
DYKNRGISGSHKGQIVWKIDCGSHLTDPETSVCFRYYHGVTGVLRATTPSVTIRKISAAA
LKPVVSPEVNHGLGNRRLINFSLSDLQAVGLKKGMFFYPDPYLKLSIQPGKHSIFPSLPH
HGQEKRSGVVCNTVNPQWSTERFNFVSLPTDVLEIEVKDKFAKSRPIIKRFLGKLSVPVQ
RLLEKHAIGDRVVSYSLGRKLPTDHVCGQLLFCFELTSSIHPDDEEVSLVMELACAEQGN
AAEVNHAAGVPDDDALSVGPDVTELPMDAPPEAGTPTNQDNSPTEREEEETTAQVEQGAV
EEENTVRDEPPPSQPEEQQEGGVLPEPQERGEEERREESVPQTEEEVVVEEEAEDKTQLE
SEDPAAAPMNDGTAAVEENPPSQEVLQEVTEAGETSCAPCSCQSLFTSYSSHAPARRKTR
PCSLPVSELETVIASACGEPETPRSHYIRIHHLLHSLPSATAPSQEKEPMGEGESMSTAE
DSDATSPTLKTSKDEEWEQEEEDTTHSPSQVPECPGPCCQRSLPRSLSIERLSELNQLLE
GDAGRGGLAAGRRISPSCLESEEGDSSNGGGRRVCGSTHRPPGEHECEFCDTSCYSTSCY
STSCYSTSCYSNSGYEWRGRFCSHTRLSSVDSNRLSGSTVFSSQDEDEDEESAFESVPDV
VPPEGPDIGGAGGERRTGRWKEARKGEQGEPVVPGPSDKNSIGPDFSPPVGNVPVLRPSH
DPNHFPAATDQALPPNWEARVDSHGRVFYVDHINRTTTWQRPSNSGKCNHGISRSGSTQQ
MEQLNRRYQNIQRTMATEEDAGSQRSDSDSEPAQTGPASPVNNQKVTNLLQSPAVKFITH
PEFFTVLHSNYAAYRMFTSSSCVKHMILKVRRDARNFERYQHNRDLVVFLNKFADTQLEL
PRGWEIKTDPQGKSFFVDHNSRATTFIDPRIPLQNGQLPGHLAHKQHLQRLRSYSAGEAS
EVSRSRGASLMARPGNSLVAAIRSQHHTDPQQLNTLSYNDKIVGFLRQPNIFDMLQERQP
SLSRNHTLREKIHYIRTEGNQGVEKLSCDADLVILLSLFEEDIMSYIPPYAVHPGFSFSP
RCSPVSSPQNSPGLQRARAPAPYRRDFEAKLRNFYRKLEAKGYGQGPGKIKLLIRREHLL
EGTFNQVMAYSRKELQRNKLYVTFLGEEGLDYSGPSREFFFLLSQELFNPYYGLFEYSAN
DTYTVQISPMSAFVENHLEWFRFSGRILGLALIHQYLLDAFFTRPFYKALLRLATDLSDL
EYLDEEFHQSLQWMKDNDITDILDLTFTVNEEVFGQVTERELKSGGSHLQVTEKNKKDYI
ERMAKWRVERGVVQQTEALVRGFYEVVDSRLVSVFDARELELVIAGTVEIDLSDWRSNTE
YRGGYHDGHIVMRWFWAAVERFTNEQRLRLLQFVTGTSSVPYEGFAALRGSNGLRRFCIE
KWGKVTSLPRAHTCFNRLDLPPYPSYITLYEKLLVAVEETSTFGLE
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgcagctctgtagtttcaagaacctgtaccagaaccggttcctgagcctggct
gccatggccaccccgacccgccaacgctttaaggatgcaacgcgccacagttacagcccc
gagacctacgctgtcaacggtctgaaccaggacgccttcacgctggcattaccccgctcc
actagtgacactgatctggtctcaccagacactcgctccacactcaccgtcagctccgcc
cactatgtgatcgggcagtctgaagacctggtcatcacatgggacatcaaggaggaagtg
gacgctggagactggattggaatgtatcttgttgatgaggctctgtctgagaactttttg
gattacaagaaccgaggcatcagtggatctcacaagggacagatagtttggaaaattgat
tgcggctcccacttgactgaccctgagacctcggtgtgcttcaggtactaccatggagtc
accggagtgctgagggccactactcccagtgtgaccatcaggaagatctccgctgctgca
ttaaagccagtggtgagtcctgaagtcaaccatggactgggcaacagaagactcattaac
ttttccctgtcagaccttcaggcagttggtctgaagaaggggatgttcttctatcccgac
ccgtacctgaaactctccatccagcctgggaaacacagcatcttcccctcgctgccgcac
cacggccaggagaaacgctctggagtggtgtgcaacacagtcaaccctcagtggagcaca
gagaggtttaactttgtgtctctgcctactgacgtcctggagatcgaggtgaaggacaag
tttgctaagagtcggccaatcatcaagcgttttctgggaaagctctccgtgcctgtccag
agactgctggaaaaacatgctatcggagatcgagttgtgagttattctctgggccgcaag
ttgccgacagatcatgtctgtgggcagctgctgttctgttttgagctgacatcgtctatc
cacccagatgatgaggaggtctctctggtcatggagctggcctgcgcagagcagggaaat
gcagccgaagtgaaccatgctgctggtgtccctgatgatgatgctctgagtgtgggccct
gacgtgactgagctccccatggatgctcctcctgaggcaggcactcccacaaatcaggac
aactcccccactgagagggaggaagaggagacaactgctcaggtggagcagggggctgta
gaggaggagaacacagtgagggatgaacccccgccctcacagcctgaagaacagcaagag
gggggcgtcttacctgaaccgcaggagagaggagaagaggagcggagagaggagtcagtt
ccacaaactgaggaggaggtggtggtagaagaggaggctgaggacaaaacacagctggag
tctgaagatcctgccgcagcaccaatgaatgatggaactgctgctgtggaggagaaccct
ccatcccaggaagtcctgcaggaggtgacagaggcaggcgaaacaagctgtgctccttgc
tcctgccagtctctcttcacaagctacagctcccatgctcccgcacggcgtaaaacccgc
ccttgctccctcccagtgtcagagctggagactgtgattgcgtcggcttgcggcgagcca
gaaacaccgagatcccactacatccggattcaccacctcctccatagcctcccctcggcc
acagctcccagccaggagaaggagccaatgggggagggagaaagcatgagcactgctgag
gactccgacgctacatcaccgacactcaaaacatctaaagacgaggagtgggagcaggag
gaggaggatacgacccattctccatctcaggtgccagagtgtcctgggccctgctgccag
cgctctctgccccgcagcctctccattgagcgcctgtctgagctcaaccagctcctggaa
ggcgatgcaggaagaggaggtcttgcagcagggaggaggatctctccctcctgtctggag
agtgaagagggagattctagtaacggaggaggaaggagagtttgtggcagcacccacagg
cctccgggggagcacgaatgtgagttctgcgacacttcctgctacagcacctcctgctac
agcacgtcctgttatagcacatcgtgctacagcaactcgggctacgagtggaggggccgc
ttctgcagccacacccgcctatcctcagtggacagcaaccggctctccggcagcaccgtg
ttctcctctcaggatgaagacgaggacgaggagagcgcctttgaatcagtgccggatgtc
gtcccgcccgagggtccggatataggcggggcaggaggagagagaaggacgggcaggtgg
aaggaggccaggaaaggagagcagggggagccagttgtgcctggacccagtgacaaaaac
agcatcggcccagacttctcccctcccgttggcaatgttccagttctgcgacccagccat
gacccaaatcattttcctgctgccactgaccaagctttacctccaaactgggaagcccgt
gttgacagccacggcagagttttctacgtggaccacatcaacaggaccaccacctggcag
aggccgagcaacagtggaaagtgtaaccacgggatctcccgctcaggttccactcagcag
atggagcagctcaaccgaaggtaccagaacatccagaggaccatggctacagaggaggat
gctgggagtcagagatcagacagtgactctgagcctgctcagacaggtcccgcctctcct
gtcaacaaccagaaagtcaccaatctcctccagtcgcctgccgtcaagttcatcacacac
cctgagttctttactgtgttgcacagcaactatgcagcctaccgtatgttcaccagcagc
agctgtgtgaagcacatgatactgaaggtacgccgcgacgccagaaactttgagcgctac
caacataacagggacctggtggtcttcctcaacaagtttgccgacacacagctggagttg
cccagaggctgggaaatcaaaactgaccctcagggaaagtctttttttgtggaccacaac
agtcgagccacaaccttcattgaccctcgaatccctctgcagaacggccagctgccgggc
cacctcgcccacaaacagcacctgcagagactacgcagctacagcgccggggaggcctct
gaagtgtcccggagtcggggagcttctctgatggcccggcctggaaacagcctggtagca
gccatacggagccagcatcacactgacccacagcagctgaacactctatcctacaatgat
aagatcgtagggtttctacggcagcccaacatatttgatatgttgcaggagcgacaaccc
agcctaagcagaaaccacacactgagagagaagatccactacatccggactgaagggaat
cagggggtggagaagctgtcctgtgatgcagacctggtcatcctcttgagtttatttgaa
gaggatatcatgtcctacattcctccttacgccgttcacccaggcttcagcttctcccct
cgctgctcgcctgtctcctccccacagaactctccaggactgcaaagggcccgggccccg
gctccttatcgcagagacttcgaagccaaactgcgaaacttctacaggaagctagaagct
aaaggctacggccagggtccaggcaagatcaagctgttgatcaggagagaacacctcctg
gagggaaccttcaaccaggtgatggcgtattctcgtaaagagctgcagagaaacaaactc
tacgtcaccttcctgggggaggaggggttagattacagcggcccgtccagagagttcttc
tttcttctgtctcaggagctctttaatccctactatggtctgtttgaatactctgctaac
gacacgtatactgtgcagatcagcccaatgtcagcttttgttgagaaccatctggaatgg
ttccggttcagcggtcgtatcctgggcctggctctgatccatcagtacctgttggatgcg
ttcttcaccagacctttctacaaggcactgctcagactagcgacggacctctcagatctg
gagtacctggatgaggagttccaccagtctctgcagtggatgaaggacaacgacatcaca
gacatcctggacctcaccttcactgtgaatgaggaggtctttggccaggtgacggagcgg
gagctgaagtcaggcggctcccacctgcaggtcactgagaagaacaagaaggattacata
gagcgaatggctaaatggagagtggagagaggagtggtgcaacagaccgaggctctggtc
agaggcttttacgaggtggtggactccaggctggtgtcggtttttgatgcccgggagctt
gagctggtcatcgccgggacagtagagatcgacctgagcgactggaggagcaacacagag
tacagaggaggttaccatgacggccacatagtgatgcgctggttctgggcagcagtggag
aggttcaccaatgagcagcgcctccgcctgctccagtttgtcacagggacgtccagtgtt
ccctacgaaggctttgcagccttgaggggatccaacggcctccggcgcttctgcatcgag
aagtggggcaaagtcacatcactacccagggctcacacgtgtttcaaccgcctcgacttg
cccccgtacccttcatacatcacgctttatgagaaactgctggtggctgtggaggaaacc
agcacgttcggcctcgagtga
DBGET
integrated database retrieval system
