Kryptolebias marmoratus (mangrove rivulus): 108238059
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Entry
108238059 CDS
T05608
Symbol
ncam1a
Name
(RefSeq) neural cell adhesion molecule 1a isoform X1
KO
K06491
neural cell adhesion molecule
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03265
Virion - Ebolavirus and Lyssavirus
kmr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus and Lyssavirus
108238059 (ncam1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108238059 (ncam1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108238059 (ncam1a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
kmr04515
]
108238059 (ncam1a)
04090 CD molecules [BR:
kmr04090
]
108238059 (ncam1a)
00536 Glycosaminoglycan binding proteins [BR:
kmr00536
]
108238059 (ncam1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
kmr00537
]
108238059 (ncam1a)
Membrane trafficking [BR:
kmr04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
108238059 (ncam1a)
Cell adhesion molecules [BR:
kmr04515
]
Immunoglobulin superfamily
NCAM1/2
108238059 (ncam1a)
CD molecules [BR:
kmr04090
]
Proteins
108238059 (ncam1a)
Glycosaminoglycan binding proteins [BR:
kmr00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
108238059 (ncam1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
kmr00537
]
Others
108238059 (ncam1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
Ig_5
C2-set_2
V-set_CD47
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
108238059
NCBI-ProteinID:
XP_017275357
LinkDB
All DBs
Position
LG13:4154437..4398932
Genome browser
AA seq
1018 aa
AA seq
DB search
MLQIRDIMWGLLLIGCAAAVQVQITPPYGEISVGESKFFLCEVVGDAKDIDWYSPSGEKI
LPTRPNISVTSSDETSSTLTIYHANIDNAGIYKCVARDGDKEAQATVQVKIFQKITFQRA
PSPQEFNEGDNADIVCDVVSSPPPTISWKHGSKIQGSKDVRYKIMENGHLQIRGIKKSDE
GLYTCEARVMARGEIDFQTIQVVINVLPTISARKSEVNATADTGGFALLACDADGFPEPT
VTWAHNNAVLEDGDKYNLNEDGSELIIKDVKKVDEGDYTCIAKNKAGEKTEEVSLNVFVI
PNITYFNNQTASEFDEEVTLTCEASGDPTPTISWRFGNRVFTEGEQASWTRPDKYESLDK
NVVVRSHARVSSLTLKNVQFTDAGRYLCTASNSIGEDNQQMYLEVRYTPKILGLVATYTW
EGNPANISCVVDAHPGASVVWFRDGIQLTSPNSTNLKIYNTPTVSYLEITPESQNDFGSY
NCTATNAMGTESKEFLLIQAEVPSSPEIQKVEPFSSTAVVEFEEPYSRGGVPIIKYRVEW
RLIGKEWTSKEYNTVDDMTRITITGLKPETAYEVKMSAINGKGEGESTLARPFKTKPVHY
SLTIESAIPPTIAATSMTSKGEPNAPKLETISVKEGNSFKVKWIKQDDGGSPIKHYLVRY
KAKHVLDWKPELRLPPFSEYTVLAGLDWNTDYEVHVVAENQQGKSEPSITFFRTAIEPTP
IPDVVEGGSGLGTGAIVGILVVVFFLLLVAVDVTCFFLNKCGLLMCIAVNFCGKAGPGAK
SKDIEEGKAAFTKDESKEPIVEVRTEEENTPNQEGGGPTEPNETTPLTDPEPAAVDTPHM
AVNLLPSAAANAETESFSTPQSSSAKEGSSSPTKGGPTKASPKNNKATHSSTLKADPEPN
VGPLVDLSDTPKVTPSSNPTPPVLDPVSSASANVGEPQGRCDSGKAPNSSQSKDLQVDGL
TKDASNTLCSDSTTSAQNDGKTVKDDNTKSEMEVKNTTAEVKTIPNEAPQANGNESKA
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaataagggacatcatgtggggattgctgctgatcggctgcgcagctgcagtt
caggtgcaaatcactccaccatatggggaaatcagcgtaggagaatccaagtttttcctc
tgtgaagtggttggagatgctaaagacatagactggtattctcccagtggcgaaaagatc
cttccaacccggccaaacatttcggtgaccagcagcgatgaaacatcatccactctaacc
atttaccacgccaacatagacaatgctggcatctacaagtgtgtggcaagagatggagac
aaggaggctcaagctacagttcaagtgaagatctttcaaaagatcactttccaaagagca
cccagtccacaggaattcaatgagggcgacaacgctgacatagtctgcgatgttgtcagt
tctccaccaccgaccatttcttggaagcatgggtccaaaatccaaggttccaaagatgtc
cgatacaagatcatggagaacggccacctgcagatacgtggcataaagaagtccgacgag
ggcctgtatacatgtgaggctcgtgtcatggccaggggagaaatcgacttccaaacaata
caggtcgtcattaatgtgcttcccaccatttcggctagaaagtccgaggtcaatgctacg
gctgacactggtggatttgctttgttggcttgtgatgcagatgggttccctgaacctacc
gttacctgggcacataacaatgctgtccttgaagacggtgacaaatacaacttgaacgag
gatggttctgaattgataataaaggatgtcaagaaggtggatgaaggagattacacttgc
atcgccaagaacaaggcaggagagaaaacagaggaagtcagcctgaacgtgttcgtgata
cccaacattacctacttcaacaaccagactgcctcggagtttgacgaggaagtcaccctg
acctgtgaagcctcaggtgatcccacacccaccatctcctggaggtttggaaacagggtt
ttcacagaaggagagcaggcttcttggacgcgaccagacaaatatgagagccttgataag
aatgttgtggtacgcagccatgcacgggtgtcctccctcaccttaaaaaatgtccagttc
acggacgctggccgttatctctgcactgccagcaactctattggtgaagacaaccagcaa
atgtacctggaagtccgctatactccaaaaatcttaggtttagtggcgacatacacatgg
gaaggaaatccagccaacataagttgtgtggttgatgctcaccccggagcctcagtggtt
tggttcagagatggcatccagctgacaagtcccaactcaaccaacttgaaaatctacaat
acgccaaccgtcagctacctggagattacaccggagtcacaaaatgactttgggagctac
aactgcacagcaactaatgcgatgggcaccgaatccaaagagttccttctcattcaagca
gaggttccatcatcaccagaaatccaaaaagtggaaccattctcaagcacagcagtggta
gagtttgaggaaccttactccagggggggtgtgcccatcataaagtacagagtggaatgg
cgtttgattggaaaagagtggaccagcaaggagtacaacactgtggatgacatgaccagg
ataaccatcactggactgaaaccggagacagcctacgaggtcaagatgtcggccatcaat
gggaaaggtgaaggcgagagcacccttgccagacctttcaagacaaagccagtccattat
tctctcacaattgaatctgcgataccacccactattgctgccaccagcatgaccagtaaa
ggagaacccaatgcccccaaactagagaccatatctgtaaaagaggggaattcctttaag
gtcaaatggatcaaacaggatgacggtggctctcccattaaacactacctggtcagatac
aaagctaaacacgtattggactggaaaccagagctccgccttccccctttcagtgagtac
acagtgctggccggtctggattggaacacagattacgaggtccacgtggtggcagagaac
cagcagggcaaatctgagccttccatcactttcttcaggacagctatagagcccactccc
atcccagatgttgtggaaggcggctcaggactgggcactggagccattgtaggcatcctg
gttgttgtcttcttcctgctgttggttgccgtggatgtcacctgctttttcctcaacaag
tgtgggcttctaatgtgcatcgccgttaacttctgtgggaaagctggaccaggggccaag
agcaaggacattgaggagggaaaggcagcattcacaaaagatgagtctaaggagccaatt
gttgaagtgagaacagaggaggaaaacactccaaaccaagaaggagggggtcccactgag
cctaacgagaccactccactgacagatccagagcctgctgctgtagataccccgcacatg
gcagtaaacttactcccctccgctgctgctaacgccgaaactgagagctttagcacgcca
cagagtagttctgcgaaagagggctcttccagtccaaccaaagggggtcctaccaaagct
tctcccaaaaacaacaaagccacccattccagtacgcttaaagctgaccctgaacctaac
gtcggccctctggttgaccttagtgacactcctaaagttaccccttcctccaatccaaca
cctcctgtgttagatccagtcagctccgcctctgctaatgttggagagccacagggccgg
tgtgactcgggtaaagcccccaacagcagccagagtaaagatttacaagtagacggcctg
accaaggacgcttccaataccctgtgctcagactcgaccacatcagcccaaaatgacggt
aagactgtgaaggatgataacactaaaagcgagatggaggtgaagaacactacagctgag
gtgaagacgattcccaacgaggctcctcaggcgaacggcaacgagagtaaagcgtaa
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