Kryptolebias marmoratus (mangrove rivulus): 108239282
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Entry
108239282 CDS
T05608
Symbol
cacna1aa
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X1
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04010
MAPK signaling pathway
kmr04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108239282 (cacna1aa)
04020 Calcium signaling pathway
108239282 (cacna1aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108239282 (cacna1aa)
Ion channels [BR:
kmr04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108239282 (cacna1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
108239282
NCBI-ProteinID:
XP_017277372
LinkDB
All DBs
Position
LG12:13068798..13161127
Genome browser
AA seq
2534 aa
AA seq
DB search
MARFGDEVPARYGGVGGGGGGGPGGMGPGGRGGSRQGGPHGHGHGAHGAHGHGPPHGGPG
AQRMYKQSMAQRARTMALYNPIPVRQNCFTVNRSLFIFSEDNFVRKYAKKITEWPPFEWM
ILATIIANCIVLALEQHLPDGDKTPLSERLDDTEPYFIGIFCFESGIKILALGFAFHKNS
YLRNGWNVMDFVVVLTGILSTVGSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAM
IPLLQIGLLLFFAILMFAIIGLEFYIGKFHQTCFDNYTGEIREEFPCGHEPPSRLCPEGT
VCRSYWLGPNYGITQFDNILFAILTVFQCITMEGWTDLLYYSNDASGSAWNWMYFIPLII
IGSFFMLNLVLGVLSGEFAKERERVENRREFLKLRRQQQIERELNGYLEWICKAEEVILA
DDENENDYDGSRRRATKNHKSKAELLNPEEGEGDLAVGSPFARASLKSSKLEGSTFKRRE
RRFRFFVRRVVKSQAFYWTVLCLVGLNTLCVAVVHYNQPEPLSDFLFYAEFIFLGIFLTE
MFIKLYGLGRQAYLNSSFNCFDCIVISGSIFEVLWSIIQPGTSFGISVLRALRLLRIFKV
TKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFENGTPPTNFDT
FPAAIMTVFQILTGEDWNMVMYDGIKSQGGVNKGMAFSVFFIVLTLFGNYTLLNVFLAIA
VDNLANAQELTKDEQEEEEAASQKIALQKAKEVAEVSPLSAANLSIAANKVHSECHNASD
PFLDCKEQQRNHTKGVNKSVWEQRTKELRKQTLASSREALYNELDTDDRWKARTGREEHN
NVNFARHNRPDMKTHLDRPLVVDPRENRNNNTNKNTANNSDLCVTQHHPADELHKQTQLQ
QHHTQQSGGGGGGSNPPRPPLDRGESTESRRSRRGEHHHHKSHVRLDATVIPGPGSEERP
TRRHHHTRSGSQGGGQSEHRKPRSHRKSAEAGEDGGGGGAAGKSGRHRSKGMEGGGEGGE
QEGAGDGSERKPRRSRHGNQDGEGRRMCQHRRKECSVPNLSTTRPIQKSLSRQNSQYSED
MDNLMNTKLVSGSSPPNDGHNNLLANHTVVPGYGSALHLAKSGTHGSLVTLDSYGNIGHH
RAHSVIRLPHPDYTAVDMPIFPSINAILQVNKNANTEPLPAKEDKDDDDDKGGEGGPRPM
PPYSSMFIMSTTNPFRRACHYVCTLRYFEMCILLVIAMSSIALAAEDPVWPDSPRNNVLR
YFDYVFTGVFTFEMLIKMVDLGLVLHQGSYFRDLWNILDFIVVSGALVAFAFTGGGGSSK
GKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYLLFMFIFAVVA
VQLFKGRFFYCTDESKEFERDCRGEYLVYERDNEVRAQKREWKKYDFHYDNVAWALLTLF
TVSTGEGWPQVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITF
QEQGDKMMEDYSLEKNERACIDFAINAKPLTRHMPQNKLSFQYRMWEFVVSPPFEYTIMA
MIALNTIVLMMKYDEASPTYEAVLANLNIVFTSLFSLECVLKIIAFGALNYFKDAWNIFD
CVTVLGSITDILVTELGMDNFINLSFLRLFRAARLIKLLRQGETIRILLWTFVQSFKALP
YVCLLIAMLFFIYAIIGMQLFGNIAIEEDGESAINQHNNFRTFVQALMLLFRSATGEAWH
EIMLACLGGKECDPLSGNTEPECGSQVAYLYFVSFIFFCSFLMLNLFVAVIMDNFEYLTR
DSSILGPHHLDEYVRIWAEYDPAACGRIHYKDMYSLLRVIDPPLGLGKKCPHRVACKRLL
RMDLPVADDSTVHFNSTLMALIRTALDIKIAKGGIDKHQMDAELRKEMMAIWPNLSQKAL
DLLVTPHKATDLTVGKIYAAMMIMEYYRQSKIKRSQALRDEQNRTPLLFQRVEPPTPSQD
GGPGLNNALPPPDITNTGNSLPVEGGIPESHSWVTDRAKEMSQKVGSWSPEGHSEDGLGS
MTNSQTVEMKEMGRDGNSDTEHFPPMEGHGRAASMPRLPGDNQQRRKGKHRGSNLSTIND
SSPMKRSASSLGHSRSGRGLRDKGGEDDYNMERTIPEEGRASRHGHRRKDRSHRASERSL
CRYNEADAGLGPDQSGDLPSKEKDRDRGRSKDRKHHHHHHHHHGSIDKERYVAERGGEFG
HRHSREREHDRDRDRDRDRDRDRDRDRERDRRWSRSPSEGRECVPHRQGSSSVSGSPVPS
TSGTSTPRRGRRQLPQTPATPRPHVTYSPVVRKPVPTPPGGPQSRPPAPVPRHFSPEPFQ
GQGPPPAGMPMAHHATPRQGHHPPVRWGDTGSGGGSIEGDGCFYNQEYQDYEPHHEPPAY
EPNPIQGGNPHPHALANHPLPPPAQPQPHNPHPVPPPQAHPVSNPHLQPARTSPRTVHHA
PPPTTALTGPVQSQVQPAAQRRLPNGYRASSPSTHLHGPPHTGPHKVPPPAGHPRGSRKG
LHEPYGETEEDDWC
NT seq
7605 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggttcggagatgaggtgccggccaggtacggcggcgtcggcggcggcggcgga
gggggccccggcggaatggggcccgggggccgcggtggcagcaggcaaggtggaccccac
ggacacgggcacggcgcgcacggtgcgcacggccacggaccaccacacggagggcccggg
gcacagaggatgtacaagcagtccatggcgcagagggcccggaccatggccctctataac
cccatccccgtgcgccagaactgcttcactgtcaaccgctcgctgtttatcttcagcgag
gacaacttcgtgaggaaatatgccaaaaagatcaccgaatggcctccgtttgagtggatg
attcttgccaccatcattgccaactgtatcgtcctggctctggagcaacatttacctgat
ggagacaagacgccgctgtctgaacggctggatgatacagagccatacttcattgggatc
ttctgctttgagtctggaataaagatcctagcacttggttttgccttccacaagaactcg
tacctgagaaatggatggaacgtcatggactttgtggtggtgctcacagggattctgtcc
actgtgggttcagatttcgacttgcggacccttcgggctgtgagggtattgaggcctctc
aaactggtgtccggtatacccagcttacaggtggtgctcaaatctatcatgaaggccatg
attcctctgctgcaaattggcctgcttcttttctttgccatcctcatgtttgccatcatc
ggcctggagttctacattggaaaattccaccaaacctgctttgacaattacacaggagag
atccgagaagagtttccatgtggccacgaacctccgtcacggctttgcccagagggcacc
gtttgtaggagttactggttgggaccaaactacggcatcacccaatttgacaacatcctg
tttgctattctcaccgtcttccagtgtatcaccatggagggttggacagatctgctctac
tatagcaacgacgcctcagggagtgcgtggaactggatgtacttcatccccttaatcatc
attggctccttcttcatgctcaacctggtgcttggcgtattgtcaggggagtttgccaaa
gagagagagcgtgtggagaacaggcgagagttcctgaagctccgacggcagcagcagatt
gaaagggaacttaatggttaccttgagtggatctgcaaggctgaagaagtcatcttggca
gatgatgaaaatgaaaatgattatgacggttctcgtaggagagccacaaagaaccataag
agcaaagcagagcttttaaacccggaggaaggggagggggacctggcagtaggttcaccg
ttcgcccgtgccagtctgaaaagctcaaaactggagggatcaacgttcaagcggcgggag
cgccggtttcgcttttttgtgcgacgcgtggttaagtcccaggccttctactggactgta
ctgtgtttggtgggcctcaacacactgtgtgtggctgtagtgcactacaaccagcctgaa
ccactttcagattttctattttatgctgaattcatctttctgggaatattcctgacagag
atgtttataaaattgtatggcctgggcagacaggcctacctcaactcctcattcaactgc
ttcgattgcatcgtgataagtggtagtatatttgaagtgttgtggtccatcatccagccg
ggcacatcgtttggcatcagtgtgctccgagctctcaggttattaaggatctttaaagtc
accaagtactgggcatcgttgcgtaacctcgtcgtctcactgctcaactccatgaagtcc
atcatcagcttgctcttcctgctcttcctcttcatagttgtctttgccctgctgggcatg
cagctcttcggaggacagtttaattttgaaaacggcacccctccgaccaatttcgatacc
ttccccgcagcaataatgacagtgtttcagatcctgactggtgaggactggaacatggtg
atgtacgatggcatcaagtctcagggcggagttaacaaaggaatggccttctctgtcttc
ttcattgtcctcaccctttttggcaactacactctgcttaatgtgttcttggctatcgct
gtggacaatttggctaacgcacaagaactgaccaaggatgagcaggaggaagaagaggct
gccagtcagaagatcgccctgcagaaagccaaggaggtggctgaagtcagcccgttgtca
gccgccaacctctccatcgcagccaacaaagtacacagtgagtgtcacaacgcgtccgac
ccctttctggactgtaaagagcagcagagaaaccacactaaaggggtgaataagtcagtg
tgggaacagcgcaccaaggagctgaggaagcagactctggcatccagccgcgaggccctc
tacaacgagctggacaccgatgatcgctggaaggcaaggacagggagggaggagcacaac
aatgtcaactttgcacgtcacaaccgtccagatatgaaaacccatctggatcggccctta
gtggtcgacccccgcgagaaccgaaacaacaacaccaacaagaacactgccaacaattcg
gacctctgtgtcacccagcaccatcctgctgatgaactccacaaacaaacccagctccaa
caacaccacacccaacagagtgggggtggcggaggaggttcaaacccacccaggcctccg
cttgatcgaggggagtccacagagagtaggcggagccgcagaggtgagcaccaccatcac
aagtcccatgtccgactggatgctacggtcattcctggacctggctcggaagagaggccg
accaggcgccatcaccatacccggagcggcagtcaagggggaggacagtcggagcacagg
aaacccaggtcacacagaaaaagtgcagaagccggggaggacggtggtggaggaggagca
gctggaaaatcagggagacacaggagtaaagggatggagggaggtggagaaggaggagag
caggagggcgctggcgacggcagcgagagaaagccgagaagaagtcggcacggcaatcaa
gacggagaggggaggagaatgtgccagcacagacggaaggaatgcagtgtcccaaacctc
tccaccacacgacccatccagaagagcctctccaggcaaaatagtcagtacagtgaggat
atggacaacctcatgaataccaaactggtttctggctcttctccacccaatgacggtcac
aataatctacttgccaatcatactgtggtccctggctatggctctgccctgcatcttgct
aaaagtggtactcatgggagtttagtcacattagatagctatgggaacattggacatcat
cgtgcacacagtgtgatcaggctgccccaccctgactacacagctgtggacatgccgata
ttcccatccattaatgccatactgcaagttaataaaaacgccaacaccgagcctcttcca
gcaaaggaagataaggatgatgatgatgataagggaggtgaaggaggtcccaggcccatg
ccgccatatagctccatgtttatcatgtccaccactaacccctttcgacgggcatgccac
tatgtttgcactttacgttattttgagatgtgcatcctgctggtcattgccatgagcagt
atcgccttggctgctgaagatcccgtctggcctgattcccctcgaaacaatgtactccgc
tatttcgactatgttttcacaggagtgttcacatttgaaatgctgataaagatggtggat
ctggggttggtcttgcaccagggctcttatttccgggacttgtggaacatccttgacttt
atagtggttagtggtgctctggtggcctttgccttcaccggtggcggggggagcagtaag
ggaaaagacatcagtactatcaagtctttgagggttctgcgagtgctacgtcctttgaag
actattaaacgtctccccaagctcaaggccgtgtttgattgtgtggtgaactctctgaag
aatgtgctgaacatcctgatcgtctacctgctcttcatgttcatttttgcggtggtggct
gtgcagctcttcaaggggcgctttttttactgcactgatgagtccaaagagtttgagcgt
gactgcagaggtgaatatctggtgtatgagcgtgataacgaagtgagggcgcagaagcgg
gagtggaagaaatacgatttccactatgataacgtggcttgggcccttctcaccctcttc
actgtttccactggagaggggtggccgcaggtgctaaaacattcagtagatgcgacctat
gagaatcagggcccaagcccgggataccggatggagatgtccatcttttacgtggtgtac
ttcgtggtcttccccttcttcttcgtcaacattttcgttgctctcatcatcatcaccttc
caagaacagggagacaagatgatggaggactacagtttagaaaagaatgagagagcctgt
atagactttgccatcaacgccaagcctctgacacgccacatgcctcagaacaagctgagc
tttcagtatcgaatgtgggagtttgtggtgtcgccaccttttgagtatacgatcatggct
atgattgcactcaacacgatagtgctgatgatgaagtatgacgaagcttctcccacctac
gaagctgtgttagccaacctgaacatagtgtttacctccctcttttccttggagtgtgta
ctcaagatcattgccttcggagctctgaattattttaaagacgcctggaacatttttgac
tgtgtgacagttctgggcagcatcactgacatcctggtcacggagcttgggatggataat
ttcatcaacctgagtttcctgaggctgttcagggcagctcgtctcatcaagctgctcagg
cagggagaaaccattcgcatcctgctctggaccttcgttcagtctttcaaggcgctgcct
tatgtctgccttctcattgccatgctgtttttcatctacgccatcatcgggatgcagctg
tttgggaatattgcaatcgaagaagatggagagagcgctatcaaccagcacaacaacttc
aggacctttgtacaggctctgatgctcctctttaggagtgcgacaggagaggcgtggcat
gagatcatgctggcgtgcctggggggtaaggagtgtgaccccctgtcagggaatacagag
ccagagtgtggcagccaggttgcctacctctactttgtctccttcatcttcttctgttcg
tttttgatgctgaatctgtttgtagccgtcatcatggacaactttgagtacctaactaga
gattcgtccattctgggacctcaccacctggatgagtatgtaaggatatgggccgagtat
gatcctgctgcatgcgggcgcatacattataaggacatgtacagtttattacgagttatc
gacccgcctcttggcttaggcaagaaatgcccccatagggtggcctgcaagaggttgctc
cgtatggatctccctgtggccgacgacagcaccgtccactttaactctactctcatggct
ttgatccggacagcgttggacatcaagatcgccaagggtggtatcgacaagcaccagatg
gacgcggagctgaggaaagagatgatggccatctggcccaacctctcccagaaagcgctg
gatttgctggttacgcctcataaagcgacggacctgactgtggggaagatctacgctgcc
atgatgatcatggagtactaccggcagagcaagatcaaacggtcgcaggctcttcgcgac
gagcagaatcgaacgccattactgtttcagcgcgtggagccgcctaccccctctcaggac
gggggtccgggacttaacaacgccctgcctccacctgacataacgaatactggcaacagc
ctgccggtggagggtgggatcccggaaagccattcatgggtgacggatcgtgccaaggag
atgtcccagaaggttggcagctggagccctgaaggccactctgaggacggccttggaagc
atgaccaactcccagacggtagagatgaaggagatggggcgggatggtaactcggatact
gagcactttccaccaatggaaggccatggcagggccgcttccatgccccgcctcccaggc
gacaaccaacagcggaggaaagggaagcaccgtggcagtaacctcagtaccatcaatgac
agcagtcccatgaaacggtccgcctcgtctctgggccacagccggtccggtcggggactc
agagacaaaggaggggaagacgattacaacatggagcgcaccatacctgaggagggacga
gcgtccaggcacggacaccgtcgaaaagaccggagtcaccgggcgtctgagaggtccctg
tgtcgctacaatgaggctgacgcaggcctgggcccagaccagtcaggtgacctgccttca
aaagagaaggatcgagatcggggtcgctccaaagaccgcaagcatcaccaccatcatcac
catcaccacggctccattgataaggagcgctacgtagcagagagagggggcgagtttgga
caccggcactcccgggagcgagagcatgaccgggaccgggacagggaccgggatcgggac
agggacagggacagggacagagagagggaccgacgctggtcacgatcgcccagcgagggc
cgggagtgcgtcccacacagacagggcagtagttcagtcagcggaagtcctgtcccatca
acctcggggaccagtacaccgcgcagaggtcgccgacagttgcctcagacacctgccacc
ccccggccccatgtcacatactcccctgtagtccgtaaacccgtacccacacctcctggg
ggaccgcagagcagacccccagccccagtccctcggcacttttccccagagcctttccaa
ggacagggtcctccccctgctggaatgccgatggcccaccacgccacgccccgccagggt
catcaccccccggttcgctggggagacacgggcagtggtggtggttccatagagggggat
ggctgcttctacaaccaggaataccaggactacgagccgcaccatgaaccgcctgcctat
gagccaaaccccattcagggtggaaacccccaccctcacgccctggccaaccacccactg
ccacctcccgcacaaccccagcctcacaacccccaccccgtccctcccccgcaggctcac
cctgtcagcaatccccacctgcagcctgctcgcacgtcaccaaggactgtccaccacgcg
cctcctcccaccactgccctgaccgggcctgtacagagccaggttcagcccgccgcccag
cgccgcctgccgaacggctacagagcctcatcgccgtccacgcatctccacggacccccg
cacactggacctcacaaagttccccctccagctgggcatcctaggggttctcgtaagggc
ctgcatgaaccctatggtgagacagaggaagacgattggtgctag
DBGET
integrated database retrieval system
