Kryptolebias marmoratus (mangrove rivulus): 108247524
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Entry
108247524 CDS
T05608
Symbol
traf7
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108247524 (traf7)
Enzymes [BR:
kmr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108247524 (traf7)
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
108247524 (traf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
WD40_like
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
Sina_ZnF
zf-TRAF
Nup160
zf-C3HC4_3
zf-RING_5
Filament
DUF1664
DUF4164
DUF16
Motif
Other DBs
NCBI-GeneID:
108247524
NCBI-ProteinID:
XP_017291204
UniProt:
A0A3Q3A6M9
LinkDB
All DBs
Position
LG12:19445724..19463423
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AA seq
694 aa
AA seq
DB search
MSSSKTPRYNQFNGGAAAATSSVPSCPSTPPADSGSGGRMEASFGPTFSAVASGSKAEGS
SSYKQHRRTPSSSSTLTYSPRDDDEGMPPIGTPRRSDSAISVRSLHSESNMSLRSTFSLH
EEEEDTEPQVFAEQPSVKLCCQLCCNVFKDPVITTCGHTFCRRCALTSDKCPVDTAKLTV
VVNNIAVAEQIGELFIHCKYGCRATPSSASGAAAAVTTSVAGKPGAFEVDPLGCPFTIKL
SARKEHEATCDYRPVRCPNNPSCPPLLTMNLETHLKECEHIKCPHSKYGCTFIGNQDTYE
THLEVCKFEGLKEFLQQTDDRFHEMQLTLAQKDQDIAFLRSMLGKLSEKLDQLEKNLELK
FDMLDENQSKLSEDLMEFRRDASMLNDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQ
GPVWCLCVYSTGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGNKLYSGS
ADCTIIVWDIQTLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKEL
TGLNHWVRALVASQNHLYSGSYQTIKIWDIRSLECVHVLQTSGGSVYSIAVTNHHIVCGT
YENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICT
QTLLRHQGSVTALAVSRGRLFSGAVDSTVKVWTC
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagtaagacccctcgctacaaccagttcaacggaggagcagcagccgccaca
tcgtccgtccccagctgtccctccacgcctccagcagactccggcagcgggggcaggatg
gaggcgtcgtttggccccaccttctcagcagtggcttctggatctaaagccgaagggtcc
agttcgtacaaacagcacagaaggaccccctcctcctcgagcaccctgacctactccccc
cgcgatgacgacgaaggaatgcctcccatcgggactccccggaggtctgattcggccatc
tcggtccggtctctccactcggagtccaacatgtcgctgcgctccactttctccctgcac
gaggaggaggaagacacggagccccaagtgttcgccgagcagccctcagtgaagctctgc
tgccagctgtgctgcaacgtcttcaaggaccccgtcatcaccacgtgtgggcacaccttc
tgcagacgctgtgccttgacttcagataagtgccccgtggacaccgcgaagctgaccgtc
gtcgtgaacaacatcgccgtggccgagcagatcggcgagctgttcattcactgtaaatac
ggctgccgagccacgccaagcagcgcgagcggggccgccgccgccgtcacgacctctgtg
gcagggaagcccggggcgttcgaggtggacccgctgggctgcccgttcaccatcaaactg
tccgcacgcaaagaacacgaggcgacgtgcgactaccggccagtacggtgtcccaacaac
ccctcctgtccccccctgctcaccatgaacctggagactcacctgaaggaatgcgagcac
atcaagtgtcctcactccaaatacggctgtaccttcataggaaaccaggacacgtatgag
acccatctggaggtctgtaagtttgaaggtctgaaggagtttctgcagcagaccgacgac
aggttccacgagatgcagctgactctggctcagaaggaccaagacatcgctttcctgcgc
tccatgttgggcaaactctctgagaagttggatcagctggagaaaaacctggagctcaag
tttgatatgctggatgagaaccagagtaaactcagcgaggacctgatggagtttcggaga
gacgcctccatgcttaatgacgagttgtcccatatcaacgccagactcaacatggggatc
ctgggctcttacgacccgcagcagatcttcaagtgtaagggcacattcgtgggccaccag
ggtcccgtctggtgtctgtgcgtgtactccaccggggacctgctcttctccggctcttct
gacaagacgatcaaggtctgggacacctgcacgacctacaagtgccagaaaaccctggag
ggtcatgacggcatcgtgctggctctgtgtatccagggcaacaagctctacagcggctcg
gcggattgcaccatcatcgtgtgggacatccagaccctgcagaaggtcaacaccatccgc
gcccacgataaccccgtgtgcacgctggtctcctcccacaacatgctgttcagcggctcg
ctgaaggccattaaggtgtgggacatcgtgggcacggagctgaagctgaagaaggagctg
accggtctgaaccactgggtccgagctctggtggcctcccagaaccacctgtacagcggc
tcctatcagaccatcaagatttgggacatccgctccctggagtgcgtgcacgtcctgcag
accagcggcggcagcgtctactccatcgctgtcaccaaccaccacatcgtctgcggcacc
tatgagaacctcatccatgtgtgggatattgagtctaaagaacaagtgcggaccttgacg
ggtcacgtgggaacggtctacgctctggctgtcatctcgaccccggaccagactaaagtc
ttcagcgcctcctacgaccgctctctccgggtttggagcatggacaacatgatctgtacc
cagacgctgctgagacaccagggcagtgtaacggcgctggccgtctccagggggcgcctc
ttctccggcgccgtggacagcaccgtcaaggtgtggacgtgctaa
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