Kocuria sp. KD4: HBK84_08435
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Entry
HBK84_08435 CDS
T06521
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
kod
Kocuria sp. KD4
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kod03016
]
HBK84_08435 (miaB)
Enzymes [BR:
kod01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
HBK84_08435 (miaB)
Transfer RNA biogenesis [BR:
kod03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
HBK84_08435 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
Motif
Other DBs
NCBI-ProteinID:
QIR70908
UniProt:
A0A6G9V5M2
LinkDB
All DBs
Position
complement(1879681..1881186)
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AA seq
501 aa
AA seq
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MPHAVQEPVIATDAPAYEVRTLGCQMNAHDSERITGLLESAGYVPAVNRDPDLVVFNTCA
VRENADNKLYGQLGQLAPVKRRNERLQIAVGGCLAQKDRATIVDKAPWVDVVFGTHNIGS
LPVLLERARHNEQAQVEILEALETFPSALPTKREQAYAGWVSISVGCNNTCTFCIVPQLR
GKEKDRRPGDILAEVQALVDSGAVEVTLLGQNVNSYGVEFGDRGAFAKLLRACGDIQGLE
RVRFTSPHPAAFTDDVIDAMAETPNVMPQLHMPLQSGSDRILKDMRRSYRSKKFLGILDR
VRERIPHAAITTDIIVGFPGETEQDFQDTLDVVEASRFSSAFTFQYSVRPGTPAGEMANQ
VPAPVVQERFERLTALQDRISAELNRELVGARTEVLVSAQSGRKSEATHRLSGRGPDQRL
VHFSVPDGAAQPRPGDFVTVPVTGAATYHLLADPRDANEYSVRRSHGGDAWEAAQAESCG
APSSSGKPAAVGLGMPSLRKP
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgccccatgccgtgcaggaacccgtgatcgccaccgatgcacccgcctacgaagtgcgc
actctcggatgccagatgaacgcccacgactccgagcgcatcacgggactgctcgagagc
gccggatacgttcccgcggtgaaccgtgatccggacctggtcgtgttcaacacgtgtgcc
gtccgagagaacgcggacaacaagctgtacggccagctgggtcagctggcccccgtcaag
cggcgcaacgaacggttgcagatcgcggtgggcggctgcctcgcccagaaggaccgcgcc
accatcgtcgataaggccccgtgggtggacgtggtcttcgggacccacaacatcgggtcc
ctgccggtcctgctggaacgcgctcggcacaacgagcaggcccaggtggaaatcctggaa
gccctcgagacgttcccgtcggcactgccgaccaagcgggaacaggcctatgcggggtgg
gtgtccatctcggtggggtgcaacaacacgtgtacgttctgcatcgtcccccaactgcgc
ggcaaggagaaggaccgccgtcccggggacatcctcgccgaagtccaggcgctcgtggac
tccggtgcggtggaagtgaccctgctggggcagaacgtgaactcgtacggcgtggagttc
ggtgaccgcggggcgttcgccaaactgctgcgcgcctgcggggacatccaggggttggag
cgggtgcgcttcacgagtccgcaccccgcggccttcacggacgacgtgatcgatgccatg
gcggagacccccaacgtgatgcctcagttgcacatgccgctgcagtccggttcggaccgg
atcctcaaggacatgcggcgctcgtaccgttccaagaagttcctgggcatcctggaccgg
gtgcgtgagcggatcccgcacgccgcgatcaccaccgacatcatcgtgggcttcccaggg
gagaccgagcaggacttccaggacaccctggacgtcgtggaggcctcccggttctcctcc
gcgttcaccttccagtattcggtgcgcccgggcactcccgccggggagatggcgaaccag
gtccccgcccccgtggtgcaggaacgcttcgaacggttgaccgccctgcaggaccggatc
agcgcggagttgaaccgcgagctcgtgggcgcgcgcacggaggtgctcgtgagcgcccaa
tcgggccgtaaatcggaagccacgcaccgactgagcgggcggggcccggatcagcggctc
gtgcacttcagtgtcccggacggagccgcacaaccgcgcccgggagatttcgtcacggtt
ccggtgaccggggccgccacgtaccacctgctcgcggacccgcgggacgcgaacgagtac
agcgtacggcgctcccacggcggggatgcgtgggaggccgctcaggcggaatcgtgtggt
gcgccgtcgtcgtcgggcaaacccgccgccgtggggctgggcatgccgtcgctgcggaag
ccctga
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