Kosakonia oryzendophytica: O9K67_09800
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Entry
O9K67_09800 CDS
T08786
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
koo
Kosakonia oryzendophytica
Pathway
koo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
O9K67_09800 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
koo03400
]
O9K67_09800 (uvrC)
DNA repair and recombination proteins [BR:
koo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O9K67_09800 (uvrC)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH
UVR
HHH_5
HHH_3
HHH_2
Motif
Other DBs
NCBI-ProteinID:
WBT60030
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Position
2025342..2027174
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AA seq
610 aa
AA seq
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MTEVFDSKSFLKTVTSKPGVYRMYDTGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALV
AQIQQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPFIFLSADTHPRLAMHRG
AKHAKGEYFGPFPNGYAVRETLALLQKIFPVRQCENSVYRNRSRPCLQYQIGRCLGPCVA
GLVSEEEYAQQVDYVRMFLAGKDDQVLTQLIARMEKASQALEFEEAARIRDQIQAVRRVT
EKQFVSNTGDDLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELGEVVETFV
GQFYLQGSQMRTLPGEILLDFNLSDKTLLSDSLSELAGRRINVQTKPRGDRARYLKLART
NAATALSTKLSQQSTVHQRLAALASVLELSEVKRMECFDISHTMGEQTIASCVVFDANGP
LRAEYRRYNITGITPGDDYAAMNQVLRRRYGKAIEESKIPDVILIDGGKGQLGQAKAVFA
ELDVPWDKHKPLLLGVAKGADRKAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDESHDH
AISGHRKKRAKVKNTSTLETIEGVGPKRRQMLLKYMGGLQGLLNASIEEIAKVPGISQGL
AEKIFYSLKH
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgactgaagtttttgattcgaaatcatttcttaaaacggttaccagtaaacccggtgtc
tatcgtatgtatgataccggcggtaccgttatctatgtaggtaaagcgaaagacctgaaa
aaacggctttccagctattttcgcagcaacctggcgtcgcgcaagactgaagcgctggtc
gcgcagatccagcaaattgatgtgaccgttacgcacacggaaacggaagcgctgctgctt
gaacataactacatcaagttgtaccagcctcgttataacgtgctgctgcgtgatgacaaa
tcctatccctttatttttcttagcgcggatacgcacccacgcctggcgatgcaccgcggg
gcgaaacacgccaaaggagaatatttcggccctttcccgaacggttatgcagtgcgtgaa
accctggcgctcttacagaaaattttcccggtgcgccagtgtgaaaatagtgtttatcgc
aaccgttcacgcccgtgtttgcaatatcaaattggccgttgccttgggccatgcgttgcc
gggttagtgagtgaagaggagtatgcgcaacaggtggattatgtgcgcatgttcctggcg
ggcaaagacgaccaggtgctgacgcagcttatcgcgcgtatggaaaaagccagccaggcg
ctggagtttgaagaagccgctcgtattcgcgatcagatccaggcggtacgccgtgtgaca
gaaaaacagtttgtatccaatacgggcgatgacctggatgtgattggcgtcgcgtttgat
gcaggtatggcctgtgttcatgtgttgtttatccggcagggaaaagtgctggggagtcgc
agctacttcccgaaagtgcctggaggtacggaactgggtgaagtggtcgaaacctttgtc
ggccagttctatttgcagggaagccagatgcgtacgttgcctggtgagatcctgctggat
tttaatctgagcgataaaacgctgctcagcgactcgctgtcggagctggccgggcgacgc
attaatgtgcagacaaaaccgcgtggcgatcgtgcccgttatctgaagctggcgcgcacc
aacgcagcaacggcgctcagcaccaaactttcgcaacagtccacggttcatcaacgtctt
gctgcgctggccagcgtactggagctgtcagaggttaaacgtatggagtgctttgatatc
agtcataccatgggagaacagacgattgcgtcctgcgtggtgtttgatgccaatggcccg
ctacgtgcagagtatcgccgctataacattaccgggatcacccctggggatgattatgct
gcaatgaaccaggtactgcgccgccgctatggtaaggccattgaggagagtaaaatcccg
gatgtgattttaatcgatggcggcaaagggcaactggggcaggcgaaagcggtttttgcc
gagcttgacgttccctgggacaagcataaacccttgctgttaggggtagcgaagggggcc
gatcgtaaagccgggctggagacgctgttcttcgaaccggaaggcgagggcttcagcctg
ccgccggattctcctgcgttgcatgttatccagcatattcgcgatgaatcacacgatcat
gcgatcagcgggcaccggaaaaaacgtgcgaaagtgaaaaataccagtacgctggagacc
atagaaggtgtgggcccaaaacgccgccagatgttgctgaagtatatgggcggtttgcaa
gggttacttaacgccagtattgaagaaattgcaaaagtgccgggcatctcccagggactg
gcagaaaagatcttctactcgttgaaacattaa
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