Klebsiella michiganensis HKOPL1: J415_02060
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Entry
J415_02060 CDS
T03188
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
koy
Klebsiella michiganensis HKOPL1
Pathway
koy03420
Nucleotide excision repair
koy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
koy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J415_02060 (uvrD)
03430 Mismatch repair
J415_02060 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
koy03400
]
J415_02060 (uvrD)
Enzymes [BR:
koy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J415_02060 (uvrD)
DNA repair and recombination proteins [BR:
koy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J415_02060 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
J415_02060 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHW85978
LinkDB
All DBs
Position
complement(454717..456879)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAASRTNMLVLAGAGSGKTRVLVHRIAWLLSVEHCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTTQGGMWVGTFHGLAHRLLRAHHLDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINGQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN
SGRLGKKLWTDGADGEPISLYCAFNDLDEARFVVNRIKTWQENGGALEQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLKDKVLAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRMMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGVEEGMFPSQMALDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPESCVEEVRLRATVSRPVSHQRMG
TPMAENDTGYKLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaatgacaaacagcgtgaagccgttgcggca
tcacgtactaacatgctggttctggcaggcgcgggcagcggtaagacgcgcgtactggta
caccgcatcgcctggctgctgagcgttgagcactgttccccttactccattatggcggtg
acctttaccaacaaagcggcggcggaaatgcgccatcgtattggccaactgatgggtacc
acccagggcggtatgtgggtcggcactttccacgggctggcgcaccggctgctgcgcgct
catcaccttgacgccaacctgccgcaggacttccagatcctcgacagcgaagaccagctg
cgcctgctcaagcgtctgattaaggcgatgaatctcgatgagaagcagtggccgccgcgt
caggcgatgtggtacatcaacggccagaaagatgaagggctgcgcccgcaccatatacag
agctacggtaacccggttgagcagacctggcagaaagtttatcaggcctaccaggaggcc
tgcgatcgggcggggctggtggatttcgccgaactgctgctgcgcgcccacgaactgtgg
ctcaacaagccgcacattcttcagcactaccgcgagcgctttaccaatatcctggtggac
gaatttcaggataccaacaacattcagtacgcgtggatccgcctgctggcgggcgatacc
ggcaaggtgatgatcgtcggcgatgacgatcagtccatttacggctggcgcggcgcgcag
gtggagaacatccagcgcttcctcaacgatttccccggcgcggaaactatccgcctcgag
caaaactatcgctcgaccagcaatatcctcagcgcggccaacgccctgattgaaaacaac
agcgggcgcctggggaaaaagctgtggaccgacggcgccgacggcgagccgatttcgctc
tactgcgcgtttaacgatcttgatgaggcgcgctttgtcgtcaaccgcatcaaaacctgg
caggaaaacggcggggcgctggagcagtgcgcgattctgtatcgcagcaacgcccagtcg
cgcgtgctggaagaggcgctgctgcaggccagcatgccgtatcgtatttatggcggcatg
cgcttcttcgaacgccaggagatcaaagatgcgctctcctatctgcgtctgatcgccaat
cgtaatgacgacgcggcctttgagcgcgtggtgaataccccgacgcgcggtatcggcgat
cgcacgctggacgtggtgcgccagacctcgcgcgaccgtcagctgacgctgtggcaggcc
tgtcgcgagctgttaaaagataaagtgcttgccggacgcgccgccagcgccctgcagcgt
tttatggagctcattgacgccctggcgcaggaaaccgccgatatgccgctgcacgtgcag
accgatcgggtgattaaagactccggcctgcgcatgatgtacgagcaggagaaaggcgag
aaaggccagacgcgcattgaaaacttagaggagctggtgacggcaacgcgccagttcagc
tacaacgaagaagatgaagatttgatgccgctgcaggcgttcctctcgcatgcggcgctg
gaagcgggagaagggcaggcggatacctggcaggatgcggtacagctgatgaccctgcac
tcggcgaaagggctggagttcccgcaggtctttatcgtcggcgtggaagaggggatgttc
ccgagccagatggcgcttgatgagggcggccgcctggaagaagaacgccgtctggcctac
gtcggcgtcacccgcgcgatgcagaagctcacgctgacctatgcggaaacccgccgcctg
tatggcaaagaggtttatcaccgtccgtcgcgctttatcggcgagctgccggagtcgtgc
gtggaagaggtgcggctgcgcgccacggtgagccgtccggtcagccatcagcggatgggg
acgccgatggcggaaaacgacaccggctataagctgggccagcgcgtgcgccatgccaag
tttggcgaaggcacgatcgtgaacctcgaaggcagcggcgaacacagccgcctgcaggtt
gcgtttcaggggcaggggattaaatggctggtcgcggcgtatgcccggcttgaaacagtg
taa
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