Kordiimonas sp. SCSIO 12610: KFF44_06070
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Entry
KFF44_06070 CDS
T08324
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
koz
Kordiimonas sp. SCSIO 12610
Brite
KEGG Orthology (KO) [BR:
koz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
koz03009
]
KFF44_06070
Enzymes [BR:
koz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
KFF44_06070
Ribosome biogenesis [BR:
koz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KFF44_06070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
TGT_C2
Motif
Other DBs
NCBI-ProteinID:
UTW56466
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Position
complement(1353977..1354969)
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AA seq
330 aa
AA seq
DB search
MTDTYTIIVTEDTAGVRLDKLLTQHIPDMSRSRLKNLINDQAVALVSSSGARTIPTPSRT
VKPGDQIEIIIPDAVEPDPVAEDIPLDVVFEDEHIILVNKPAGMVVHPAPGSPTGTLVNA
LLHHCGDSLSGIGGVKRPGIVHRIDKDTSGIIIMAKHDKAHTGLAEQFADHSIERLYTAI
CKGHPNPANNRIEGHIARHSSDRKKMAVYDGHGKWAATHYRTIANYQAGGKAIASLIECK
LETGRTHQVRVHMNHIGHTLIGDPVYGRTAKLSGAIAGPVRAAIQSFDRQALHARTLGFI
HPISGKPFKFESELPYDMKGLVETLTPYKV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatacatataccatcatcgttaccgaagacacggcaggtgtgcgtcttgataaa
ttattgacgcagcatattcctgacatgtccaggtctaggttaaaaaacctgattaacgat
caggctgttgccttggtttcatcatctggtgcgcgcaccataccgacaccatcgcgaacg
gtcaaacccggtgatcaaattgaaatcataattcctgatgccgttgaacccgacccggtc
gcagaagatatccccttggatgtagtttttgaggacgagcatatcattcttgtgaacaaa
ccggctggtatggtcgtacaccctgcacccgggagcccaacaggtacgcttgtgaacgcg
ctgcttcatcactgcggcgatagccttagcgggattgggggtgtcaaacgccccggaatt
gttcacaggattgataaagataccagcggtatcattatcatggcaaaacatgataaggcg
cacacagggctcgctgaacagtttgccgaccactcaatcgagcgactgtataccgctata
tgcaaagggcatcctaatcccgcaaataatcgtatcgaaggccatatcgcacgtcattcc
agcgaccgtaagaaaatggctgtctatgatgggcacgggaaatgggcagcaacacattac
cgaacaattgctaattatcaggcgggcggtaaagcgattgcgtccctcattgaatgcaag
ttggaaacaggccgtacccatcaggttcgcgttcatatgaaccacatcggtcataccctg
attggtgaccctgtttatggccgtactgcaaagctgtctggcgcgattgcaggacctgta
cgcgctgccattcaatcgtttgacaggcaagccctgcatgcccgcacactcggcttcata
catccaatttcaggaaaaccctttaaattcgagagcgaattaccatatgatatgaaaggg
ctagttgaaacactgacaccatataaggtgtaa
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